RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
PRDM16-203ENST00000378391 PADI1Q9ULC6 663 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 OLFM2O95897 454 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
PRDM16-203ENST00000378391 S100A7P31151 101 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 NPBWR1P48145 328 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 HIST1H3AP68431 136 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
PRDM16-203ENST00000378391 CNEP1R1Q8N9A8 125 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 EMG1Q92979 244 aaKnown RBP13.15□□□□□ -0.3
PRDM16-203ENST00000378391 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 REEP6Q96HR9 211 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 TBC1D29Q9UFV1 150 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 VAMP5O95183 116 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 PKIAP61925 76 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 HES1Q14469 280 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 VN1R2Q8NFZ6 395 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 OR4A16Q8NH70 328 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
PRDM16-203ENST00000378391 STRAPQ9Y3F4 350 aaKnown RBP13.15□□□□□ -0.3
PRDM16-203ENST00000378391 XRCC3O43542 346 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 CD3DP04234 171 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 PPICP45877 212 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 DHRS13Q6UX07 377 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 LOC102723971A0A1B0GUV8 181 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 CD46P15529 392 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 PLP1P60201 277 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 A0A1B0GX78 115 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 ZFP92A6NM28 416 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 TUSC2O75896 110 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 Q6ZN92 141 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 SLAMF6Q96DU3 332 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 CHST11Q9NPF2 352 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 F6UZH7 168 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 M0R1X1 148 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 CNIH1O95406 144 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 HMGA2P52926 109 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 OR13H1Q8NG92 308 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 MCHR2Q969V1 340 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 PLK3Q9H4B4 646 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 ISG20L2Q9H9L3 353 aaKnown RBP13.14□□□□□ -0.31
PRDM16-203ENST00000378391 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
PRDM16-203ENST00000378391 OR6C76A6NM76 312 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 NXPH2O95156 264 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 CLLU1Q5K131 121 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 HRO43593 1189 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 SEMG1P04279 462 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 IL5P05113 134 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 GALP22466 123 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 VEGFBP49765 207 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 OR6C1Q96RD1 312 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 RAB18Q9NP72 206 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 B3GAT1Q9P2W7 334 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 ANKRD61A6NGH8 418 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 FCGR2CP31995 323 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 DCTDP32321 178 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 CSNK1EP49674 416 aaKnown RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 CDK5Q00535 292 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 SLC38A9Q8NBW4 561 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 CHAC2Q8WUX2 184 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 AUNIPQ9H7T9 357 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 UMAD1C9J7I0 102 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 ZNF749O43361 778 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 ALOX12BO75342 701 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 TMIGD3P0DMS9 266 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 ZNF628Q5EBL2 1059 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 SAPCD1Q5SSQ6 148 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 FAAP20Q6NZ36 180 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-203ENST00000378391 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
PRDM16-203ENST00000378391 SERTM1A2A2V5 107 aa13.12□□□□□ -0.31
PRDM16-203ENST00000378391 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
PRDM16-203ENST00000378391 Q6ZRG5 221 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms