RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 OR56B2PQ8NGI1 322 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 THEM6Q8WUY1 208 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 TEAD3Q99594 435 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 TOR3AQ9H497 397 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 PATZ1Q9HBE1 687 aaKnown RBP12.91□□□□□ -0.34
RAB4B-202ENST00000378307 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 MMP26Q9NRE1 261 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 LOC105371242A0A075B767 164 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 F5H0A9 414 aaPredicted RBP12.9□□□□□ -0.34
RAB4B-202ENST00000378307 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 PNPP00491 289 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
RAB4B-202ENST00000378307 ALOX5APP20292 161 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 SRP14P37108 136 aaKnown RBP12.9□□□□□ -0.34
RAB4B-202ENST00000378307 GATA4P43694 442 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 SLC15A1P46059 708 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 ESRRGP62508 458 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 OR8G1Q15617 311 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 SLX4IPQ5VYV7 408 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 LRRN1Q6UXK5 716 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 PHC2Q8IXK0 858 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 PYDC1Q8WXC3 89 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 GABARAPL1Q9H0R8 117 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
RAB4B-202ENST00000378307 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 RNF212BA8MTL3 300 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 PSMD9O00233 223 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 XRCC2O43543 280 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 FAM20BO75063 409 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 H2BFMP0C1H6 154 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 ADRA2CP18825 462 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 THBS2P35442 1172 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 MDH2P40926 338 aaKnown RBP12.89□□□□□ -0.35
RAB4B-202ENST00000378307 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 KRTAP24-1Q3LI83 254 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 ZDHHC13Q8IUH4 622 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 TCEANCQ8N8B7 351 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 CIB1Q99828 191 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 TMEM246Q9BRR3 403 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
RAB4B-202ENST00000378307 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
RAB4B-202ENST00000378307 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
RAB4B-202ENST00000378307 OPN4Q9UHM6 478 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 OAZ3Q9UMX2 235 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 PCDHB10Q9UN67 800 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 COPS3Q9UNS2 423 aa12.89□□□□□ -0.35
RAB4B-202ENST00000378307 hCG_38984A0A1B0GV85 526 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 H3BNX3 289 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 GMDSO60547 372 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 CIB2O75838 187 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
RAB4B-202ENST00000378307 WNT2P09544 360 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 PCMT1P22061 227 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 GSK3AP49840 483 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
RAB4B-202ENST00000378307 TIGD6Q17RP2 521 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 GFOD2Q3B7J2 385 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 ZNF826PQ6ZT77 177 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 WDR86Q86TI4 376 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 RFLNBQ8N5W9 214 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 CELF2-AS1Q8N7Q2 184 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 Q8TCH9 128 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 PKP2Q99959 881 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 TTTY10Q9BZA0 68 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 LRP12Q9Y561 859 aa12.88□□□□□ -0.35
RAB4B-202ENST00000378307 PPIAL4EA0A075B759 164 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 A0A0X1KG70 313 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 PPIAL4DF5H284 164 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 PPIAL4FP0DN26 164 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 ACKR3P25106 362 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 ACTR3P61158 418 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.87□□□□□ -0.35
RAB4B-202ENST00000378307 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 PPP1R14AQ96A00 147 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 CENPNQ96H22 339 aaPredicted RBP12.87□□□□□ -0.35
RAB4B-202ENST00000378307 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 IL4I1Q96RQ9 567 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 OSBPL10Q9BXB5 764 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms