RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 MMP16P51512 607 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 AQP4P55087 323 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 PRSS12P56730 875 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 TNK1Q13470 666 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 HFEQ30201 348 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 DNM1P46Q6ZS02 220 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 PRSS45Q7RTY3 260 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 OR8B12Q8NGG6 310 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 CNIH3Q8TBE1 160 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 SPSB4Q96A44 273 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 ADAT1Q9BUB4 502 aaKnown RBP12.35□□□□□ -0.43
UBE4B-203ENST00000377153 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
UBE4B-203ENST00000377153 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 MRPL15Q9P015 296 aaKnown RBP12.35□□□□□ -0.43
UBE4B-203ENST00000377153 AASSQ9UDR5 926 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 GNG8Q9UK08 70 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
UBE4B-203ENST00000377153 R4GMQ9 66 aa12.35□□□□□ -0.43
UBE4B-203ENST00000377153 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.34□□□□□ -0.43
UBE4B-203ENST00000377153 METTL15A6NJ78 407 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 NCR1O76036 304 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 CD55P08174 381 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 GNALP38405 381 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 SRP9P49458 86 aaKnown RBP12.34□□□□□ -0.43
UBE4B-203ENST00000377153 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 MED21Q13503 144 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 CSNK2A3Q8NEV1 391 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 OR10AD1Q8NGE0 317 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 NRG4Q8WWG1 115 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 LGALS12Q96DT0 336 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 C18orf12Q96KH6 178 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 SLC30A2Q9BRI3 323 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 PBOV1Q9GZY1 135 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 AMBNQ9NP70 447 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 FAM206AQ9NX38 181 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 NUFIP1Q9UHK0 495 aaKnown RBP12.34□□□□□ -0.43
UBE4B-203ENST00000377153 MRM2Q9UI43 246 aaKnown RBP12.34□□□□□ -0.43
UBE4B-203ENST00000377153 SNX5Q9Y5X3 404 aa12.34□□□□□ -0.43
UBE4B-203ENST00000377153 IGHV4-30-2A0A087WSY4 118 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 PRR32B1ATL7 298 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 RNF223E7ERA6 249 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 SMAD7O15105 426 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 RRP9O43818 475 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 CDC14BO60729 498 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 WBP4O75554 376 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 MTRF1O75570 445 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 RPP14O95059 124 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 FOSL1P15407 271 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 MYL12AP19105 171 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 MZT1Q08AG7 82 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 OR8G1Q15617 311 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 Q6ZR03 302 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 KCTD20Q7Z5Y7 419 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 TFAP2CQ92754 450 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 SGK3Q96BR1 496 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 TIMD4Q96H15 378 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 REG4Q9BYZ8 158 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 ACOXLQ9NUZ1 547 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 IL19Q9UHD0 177 aa12.33□□□□□ -0.44
UBE4B-203ENST00000377153 EXOGQ9Y2C4 368 aaKnown RBP12.33□□□□□ -0.44
UBE4B-203ENST00000377153 C5orf63A6NC05 138 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 MAGEB4O15481 346 aaPredicted RBP12.32□□□□□ -0.44
UBE4B-203ENST00000377153 GMDSO60547 372 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 GNAO1P09471 354 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 CA6P23280 308 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 GIFP27352 417 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 CRYBB2P43320 205 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 GPR6P46095 362 aaPredicted RBP12.32□□□□□ -0.44
UBE4B-203ENST00000377153 GSK3AP49840 483 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 ISL1P61371 349 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 FAM3AP98173 230 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 ZNF85Q03923 595 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 OR8B8Q15620 311 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 SMN1Q16637 294 aaKnown RBP12.32□□□□□ -0.44
UBE4B-203ENST00000377153 CDONQ4KMG0 1287 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 TP53I3Q53FA7 332 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 C6orf52Q5T4I8 152 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 LIPNQ5VXI9 398 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 THAP5Q7Z6K1 395 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 PEG10Q86TG7 708 aaKnown RBP12.32□□□□□ -0.44
UBE4B-203ENST00000377153 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 SPERTQ8NA61 448 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 OR8S1Q8NH09 359 aa12.32□□□□□ -0.44
UBE4B-203ENST00000377153 COX4I2Q96KJ9 171 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms