RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SLC2A5P22732 501 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 CA6P23280 308 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 GATA3P23771 443 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 MDH2P40926 338 aaKnown RBP18.66■□□□□ 0.58
SRM-201ENST00000376957 ZNF181Q2M3W8 571 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 NXNL2Q5VZ03 156 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 DEGS2Q6QHC5 323 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 FAM57BQ71RH2 274 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 GID4Q8IVV7 300 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 PLPP7Q8NBV4 271 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 PYDC1Q8WXC3 89 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 C14orf119Q9NWQ9 140 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 A0A0G2JMP0 313 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 A0A0X1KG70 313 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 ZAR1LA6NP61 321 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 H0YL77 283 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 TMEM178BH3BS89 294 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 PHYHO14832 338 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 MLNRO43193 412 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 MITFO75030 526 aaPredicted RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 IGHV2-70P01814 119 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 THBS2P35442 1172 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 GATA4P43694 442 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 MMP16P51512 607 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 ZNF121P58317 390 aaPredicted RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 KPNB1Q14974 876 aaKnown RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 MEPCEQ7L2J0 689 aaKnown RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 LRRC28Q86X40 367 aaPredicted RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 TCEANCQ8N8B7 351 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 CSNK2A3Q8NEV1 391 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 BBS1Q8NFJ9 593 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 OR4M2Q8NGB6 313 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 TMEM163Q8TC26 289 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 SPSB4Q96A44 273 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 REEP6Q96HR9 211 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 MNTQ99583 582 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 CIB1Q99828 191 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 ADAT1Q9BUB4 502 aaKnown RBP18.65■□□□□ 0.58
SRM-201ENST00000376957 FN3KRPQ9HA64 309 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 BRD7Q9NPI1 651 aa18.65■□□□□ 0.58
SRM-201ENST00000376957 ZNF254O75437 659 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 FOXH1O75593 365 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 ALOX5APP20292 161 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 GNALP38405 381 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 CD200P41217 278 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 SPRNQ5BIV9 151 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 C12orf73Q69YU5 71 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 FAHD2BQ6P2I3 314 aaPredicted RBP18.64■□□□□ 0.57
SRM-201ENST00000376957 MOGAT3Q86VF5 341 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 OR8S1Q8NH09 359 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 FAHD2AQ96GK7 314 aa18.64■□□□□ 0.57
SRM-201ENST00000376957 CNN2Q99439 309 aaKnown RBP18.64■□□□□ 0.57
SRM-201ENST00000376957 PRKYO43930 277 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 PNPP00491 289 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 PRSS12P56730 875 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 CDC42P60953 191 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 KCNJ8Q15842 424 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 GFOD2Q3B7J2 385 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 LRRN1Q6UXK5 716 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 OR56B2PQ8NGI1 322 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 ITFG2Q969R8 447 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 SGK3Q96BR1 496 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 RIBC2Q9H4K1 309 aa18.63■□□□□ 0.57
SRM-201ENST00000376957 ACOD1A6NK06 481 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 SAC3D1A6NKF1 404 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 J3QLI3 93 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 PLPP2O43688 288 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 FSTL3O95633 263 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 PSMA6P60900 246 aaKnown RBP18.62■□□□□ 0.57
SRM-201ENST00000376957 ESCO2Q56NI9 601 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 DCAF12L2Q5VW00 463 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 NLRC3Q7RTR2 1065 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 ZNF420Q8TAQ5 688 aaPredicted RBP18.62■□□□□ 0.57
SRM-201ENST00000376957 IL4I1Q96RQ9 567 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 AMELYQ99218 206 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 PATZ1Q9HBE1 687 aaKnown RBP18.62■□□□□ 0.57
SRM-201ENST00000376957 ABCB9Q9NP78 766 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 TRIM36Q9NQ86 728 aa18.62■□□□□ 0.57
SRM-201ENST00000376957 PPIAL4EA0A075B759 164 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 PPIAL4DF5H284 164 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 MRPL3P09001 348 aaKnown RBP18.61■□□□□ 0.57
SRM-201ENST00000376957 PPIAL4FP0DN26 164 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 DCTDP32321 178 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 ATP6V1E1P36543 226 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 FAM3AP98173 230 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 POU4F2Q12837 409 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 MAB21L1Q13394 359 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 ZMYND11Q15326 602 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 ZNF829Q3KNS6 432 aaPredicted RBP18.61■□□□□ 0.57
SRM-201ENST00000376957 IL17RELQ6ZVW7 336 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 ZNF771Q7L3S4 317 aaPredicted RBP18.61■□□□□ 0.57
SRM-201ENST00000376957 OR8J1Q8NGP2 316 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 Q8TCH9 128 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 RFKQ969G6 155 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 SIGLEC11Q96RL6 698 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 GABARAPL3Q9BY60 117 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 IMPAD1Q9NX62 359 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 MIOXQ9UGB7 285 aa18.61■□□□□ 0.57
SRM-201ENST00000376957 WARS2Q9UGM6 360 aaKnown RBP18.61■□□□□ 0.57
SRM-201ENST00000376957 IKZF2Q9UKS7 526 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms