RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SOX7Q9BT81 388 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 GAREM1Q9H706 876 aa22.41■■□□□ 1.18
C9orf40-201ENST00000376854 A0A0A6YYD4 124 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 SULT2B1O00204 365 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 CHRM2P08172 466 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 MSX1P28360 303 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 AFF3P51826 1226 aaKnown RBP22.4■■□□□ 1.18
C9orf40-201ENST00000376854 FAM69BQ5VUD6 431 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 TMEM104Q8NE00 496 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 METTL7AQ9H8H3 244 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 MBD2Q9UBB5 411 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 TIAF1O95411 115 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 MPIG6BO95866 241 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 ATRAIDQ6UW56 229 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 HOGA1Q86XE5 327 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 OR5AS1Q8N127 324 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 OR8B12Q8NGG6 310 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 OR5L2Q8NGL0 311 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 ZC4H2Q9NQZ6 224 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 PRELID1Q9Y255 219 aa22.4■■□□□ 1.18
C9orf40-201ENST00000376854 C5orf51A6NDU8 294 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 F5H0A9 414 aaPredicted RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 PTGDSP41222 190 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF121P58317 390 aaPredicted RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 GABREP78334 506 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 SNTB1Q13884 538 aaKnown RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 OR10G3Q8NGC4 313 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 FBXW5Q969U6 566 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM41AQ96HV5 264 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 WDR77Q9BQA1 342 aaPredicted RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 GPR84Q9NQS5 396 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 ASH2LQ9UBL3 628 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 C13orf42A0A1B0GVH6 325 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 A0A1W2PNR3 127 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 OR3A4PP47883 348 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 P2RY4P51582 365 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 SHBQ15464 509 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 INPP5JQ15735 1006 aaPredicted RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 PAN3Q58A45 887 aaKnown RBP22.39■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM17Q86X19 198 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 ELP5Q8TE02 316 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 DNASE2BQ8WZ79 361 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 RAB3CQ96E17 227 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 OR5B2Q96R09 309 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 WIF1Q9Y5W5 379 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 ADAMTS20P59510 1910 aa22.39■■□□□ 1.17
C9orf40-201ENST00000376854 EXPH5Q8NEV8 1989 aa22.38■■□□□ 1.17
C9orf40-201ENST00000376854 TRAF3IP2O43734 574 aaPredicted RBP22.38■■□□□ 1.17
C9orf40-201ENST00000376854 MICBQ29980 383 aa22.38■■□□□ 1.17
C9orf40-201ENST00000376854 PLAC9Q5JTB6 97 aa22.38■■□□□ 1.17
C9orf40-201ENST00000376854 ADPRHL1Q8NDY3 354 aa22.38■■□□□ 1.17
C9orf40-201ENST00000376854 FAM71F1Q96KD3 344 aaPredicted RBP22.38■■□□□ 1.17
C9orf40-201ENST00000376854 RER1O15258 196 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 SIGLEC5O15389 551 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 SOCS1O15524 211 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 CDC14BO60729 498 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 STARD6P59095 220 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 TAS2R31P59538 309 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 PPIAP62937 165 aaKnown RBP22.37■■□□□ 1.17
C9orf40-201ENST00000376854 SIGLEC14Q08ET2 396 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF574Q6ZN55 896 aaPredicted RBP22.37■■□□□ 1.17
C9orf40-201ENST00000376854 PGAP1Q75T13 922 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 OR52H1Q8NGJ2 320 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 C1orf147Q96MC9 270 aaPredicted RBP22.37■■□□□ 1.17
C9orf40-201ENST00000376854 OR6C1Q96RD1 312 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 ARPC5LQ9BPX5 153 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 BANF2Q9H503 90 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF319Q9P2F9 582 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 DBX1A6NMT0 343 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 KCNAB3O43448 404 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 GSTP1P09211 210 aaKnown RBP22.37■■□□□ 1.17
C9orf40-201ENST00000376854 CTRB1P17538 263 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 SERPINF1P36955 418 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 CTRB2Q6GPI1 263 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 SLC25A47Q6Q0C1 308 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 TERB2Q8NHR7 220 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 KCNG3Q8TAE7 436 aa22.37■■□□□ 1.17
C9orf40-201ENST00000376854 CHMP1AQ9HD42 196 aaPredicted RBP22.37■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF814B7Z6K7 855 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 OR2J2O76002 312 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 CRHP06850 196 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 GP1BAP07359 652 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 HCKP08631 526 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 HIST1H1DP16402 221 aaKnown RBP22.36■■□□□ 1.17
C9orf40-201ENST00000376854 ANOS1P23352 680 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 PSMB6P28072 239 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 SPEM1Q8N4L4 309 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM185AQ8NFB2 350 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 BPIFCQ8NFQ6 507 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 MYOTQ9UBF9 498 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 IGLV3-32A0A0A0MS00 114 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 ACY1Q03154 408 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 GFOD2Q3B7J2 385 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM71Q6P5X7 295 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 UNQ6126/PRO20091Q6UXV3 157 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 TMEM59Q9BXS4 323 aa22.36■■□□□ 1.17
C9orf40-201ENST00000376854 SCRG1O75711 98 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 ZNF17P17021 662 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 CX3CR1P49238 355 aa22.35■■□□□ 1.17
C9orf40-201ENST00000376854 CPEB2Q7Z5Q1 589 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms