RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CLPTM1LQ96KA5 538 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 ZNF747Q9BV97 191 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 RNF7Q9UBF6 113 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 ARRDC5A6NEK1 342 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 GMDSO60547 372 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 SOX14O95416 240 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 PLATP00750 562 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 SPARCP09486 303 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 PSKH1P11801 424 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 FMO3P31513 532 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 TAF13Q15543 124 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 KCNJ8Q15842 424 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 TEX30Q5JUR7 227 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 GLYATL3Q5SZD4 288 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 SHISA2Q6UWI4 295 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 ADGRG5Q8IZF4 528 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 BOLLQ8N9W6 283 aaKnown RBP17.54■□□□□ 0.4
VSX1-201ENST00000376707 OR10G2Q8NGC3 310 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 CHID1Q9BWS9 393 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 MMADHCQ9H3L0 296 aaPredicted RBP17.54■□□□□ 0.4
VSX1-201ENST00000376707 CENPMQ9NSP4 180 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 ARMC1Q9NVT9 282 aa17.54■□□□□ 0.4
VSX1-201ENST00000376707 AQP12BA6NM10 295 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 CLDN34H7C241 214 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 IFNGP01579 166 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 HOXB6P17509 224 aaKnown RBP17.53■□□□□ 0.4
VSX1-201ENST00000376707 SPI1P17947 270 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 ENTPD1P49961 510 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 PRKXP51817 358 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 SLC9A3R2Q15599 337 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 AQP12AQ8IXF9 295 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 SLAMF6Q96DU3 332 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 TECTBQ96PL2 329 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 THTPAQ9BU02 230 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 CMC2Q9NRP2 79 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 MRPL15Q9P015 296 aaKnown RBP17.53■□□□□ 0.4
VSX1-201ENST00000376707 N6AMT1Q9Y5N5 214 aa17.53■□□□□ 0.4
VSX1-201ENST00000376707 SOX21Q9Y651 276 aaPredicted RBP17.53■□□□□ 0.4
VSX1-201ENST00000376707 C5orf63A6NC05 138 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 RIIAD1A6NNX1 92 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.4
VSX1-201ENST00000376707 GYPBP06028 91 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 PSMB10P40306 273 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 NPY4RP50391 375 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 BLVRAP53004 296 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 FGF12P61328 243 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 OR8B8Q15620 311 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 SFRP4Q6FHJ7 346 aaPredicted RBP17.52■□□□□ 0.4
VSX1-201ENST00000376707 ZNF841Q6ZN19 808 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 SPERTQ8NA61 448 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 ZNF511Q8NB15 262 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 PLPP7Q8NBV4 271 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 GIPC3Q8TF64 312 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 FEVQ99581 238 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 KCNJ15Q99712 375 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 OPA3Q9H6K4 179 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 FAM53CQ9NYF3 392 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
VSX1-201ENST00000376707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.51■□□□□ 0.39
VSX1-201ENST00000376707 C3orf80F5H4A9 247 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 LGALS8O00214 317 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
VSX1-201ENST00000376707 PTBP3O95758 552 aaKnown RBP17.51■□□□□ 0.39
VSX1-201ENST00000376707 CST1P01037 141 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 SLC2A1P11166 492 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 ZNF3P17036 446 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 ANOS1P23352 680 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 HOXA4Q00056 320 aaPredicted RBP17.51■□□□□ 0.39
VSX1-201ENST00000376707 LINC01590Q5TEZ4 76 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 GPR157Q5UAW9 335 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 CD276Q5ZPR3 534 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 TRPM8Q7Z2W7 1104 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 OR6K6Q8NGW6 343 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 TEX47Q8TBZ9 253 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 CANT1Q8WVQ1 401 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 TRIM36Q9NQ86 728 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 C1orf123Q9NWV4 160 aa17.51■□□□□ 0.39
VSX1-201ENST00000376707 MDFIC2A0A1B0GVS7 189 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 DHRS12A0PJE2 317 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 A6NLC8 198 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 C22orf46C9J442 243 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 ZNF878C9JN71 531 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 TMPRSS2O15393 492 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 XRCC2O43543 280 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 GRPP07492 148 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 CLUP10909 449 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 IL13RA1P78552 427 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 MZT1Q08AG7 82 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 BRD3OSQ6XYD6 125 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 SPATC1Q76KD6 591 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 OR56B2PQ8NGI1 322 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 ZDHHC16Q969W1 377 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 UNKLQ9H9P5 680 aaKnown RBP17.5■□□□□ 0.39
VSX1-201ENST00000376707 C14orf119Q9NWQ9 140 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 KIF17Q9P2E2 1029 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 CTSZQ9UBR2 303 aa17.5■□□□□ 0.39
VSX1-201ENST00000376707 TRAV38-1A0A0B4J264 116 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 TBX1O43435 398 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms