RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TBC1D23Q9NUY8 699 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TAGLN3Q9UI15 199 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 CAB39Q9Y376 341 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-204ENST00000376643 hCG_1807616A0A1W2PRN6 198 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 TNFRSF11BO00300 401 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-204ENST00000376643 WIPF1O43516 503 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 ATP8B1O43520 1251 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 SNX3O60493 162 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 DCTN3O75935 186 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 CCNB2O95067 398 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 SPARCP09486 303 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 CFHR2P36980 270 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 SLC25A1P53007 311 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 MXRA7P84157 204 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 ZNF92Q03936 586 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.45
HDAC6-204ENST00000376643 GK3PQ14409 553 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 MPPED2Q15777 294 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 TEX30Q5JUR7 227 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 FAM201AQ5SY85 155 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 Q6YL49 198 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 ZNF841Q6ZN19 808 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 DCXRQ7Z4W1 244 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 LNX2Q8N448 690 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 OR2T33Q8NG76 320 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 CDRT15Q96T59 188 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 FAM107BQ9H098 131 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 MUC13Q9H3R2 512 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 FN3KQ9H479 309 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 RNPEPL1Q9HAU8 725 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 ABCB9Q9NP78 766 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 C1orf123Q9NWV4 160 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 COMMD3-BMI1R4GMX3 469 aa12.27□□□□□ -0.45
HDAC6-204ENST00000376643 RIIAD1A6NNX1 92 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 GPR37O15354 613 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 NDUFA7O95182 113 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 MUC1P15941 1255 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-204ENST00000376643 ZNF3P17036 446 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 HSD11B1P28845 292 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 PYCR1P32322 319 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 NAA10P41227 235 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-204ENST00000376643 RAG2P55895 527 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 OCLNQ16625 522 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 PCK2Q16822 640 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 MICBQ29980 383 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 GLYATL3Q5SZD4 288 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 LYPD2Q6UXB3 125 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 BRD3OSQ6XYD6 125 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 RHOUQ7L0Q8 258 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 SLC36A1Q7Z2H8 476 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 ARHGAP24Q8N264 748 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 BOLLQ8N9W6 283 aaKnown RBP12.26□□□□□ -0.45
HDAC6-204ENST00000376643 OR56B2PQ8NGI1 322 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 LRTOMTQ8WZ04 291 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 C12orf43Q96C57 262 aaKnown RBP12.26□□□□□ -0.45
HDAC6-204ENST00000376643 SLAMF6Q96DU3 332 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 WDFY2Q96P53 400 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 RGCCQ9H4X1 137 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 MAGIXQ9H6Y5 334 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 EGLN3Q9H6Z9 239 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 KAAG1Q9UBP8 84 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 LYVE1Q9Y5Y7 322 aa12.26□□□□□ -0.45
HDAC6-204ENST00000376643 DOCK11Q5JSL3 2073 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 C22orf46C9J442 243 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 GRPP07492 148 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 GNALP38405 381 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 TIGD6Q17RP2 521 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 SFRP4Q6FHJ7 346 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-204ENST00000376643 NAA40Q86UY6 237 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 CYB561A3Q8NBI2 242 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 SCCPDHQ8NBX0 429 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 SLC37A3Q8NCC5 494 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 CSNK2A3Q8NEV1 391 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 OR2AE1Q8NHA4 323 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 DYRK2Q92630 601 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 SPSB4Q96A44 273 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 TSSK6Q9BXA6 273 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 DPAGT1Q9H3H5 408 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 REEP1Q9H902 201 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 ACTR3BQ9P1U1 418 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 KPTNQ9Y664 436 aa12.25□□□□□ -0.45
HDAC6-204ENST00000376643 A0A1B0GVI7 797 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 FAM181BA6NEQ2 426 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 TVP23AA6NH52 213 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 ANXA2P2A6NMY6 339 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 ZNF593O00488 134 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-204ENST00000376643 TIMM23O14925 209 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 TBX1O43435 398 aa12.24□□□□□ -0.45
HDAC6-204ENST00000376643 ANXA2P07355 339 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms