RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CCL7P80098 99 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 KIAA1958Q8N8K9 716 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 OR2Z1Q8NG97 314 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ELSPBP1Q96BH3 223 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 CST7O76096 145 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 OR4E1P0C645 316 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 FABP4P15090 132 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF17P17021 662 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 G0S2P27469 103 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 FOXF1Q12946 379 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 DHRS7BQ6IAN0 325 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 OR1J1Q8NGS3 322 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SLC25A43Q8WUT9 341 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF629Q9UEG4 869 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 PTHLHP12272 177 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 HMGA1P17096 107 aaKnown RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 PMCHP20382 165 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 PRSS12P56730 875 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SP6Q3SY56 376 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 FCRL6Q6DN72 434 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 EXD3Q8N9H8 876 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 OR2M7Q8NG81 312 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 ADGRL4Q9HBW9 690 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 GDF2Q9UK05 429 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 KPTNQ9Y664 436 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 RICTORQ6R327 1708 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 STAC2Q6ZMT1 411 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 BAHD1Q8TBE0 780 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 DERL3Q96Q80 235 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 TREM2Q9NZC2 230 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 YKT6O15498 198 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SMIM17P0DL12 118 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 TAS2R45P59539 299 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 GAR1Q9NY12 217 aaKnown RBP12.4□□□□□ -0.42
COL4A1-201ENST00000375820 GOSR1O95249 250 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 DDOSTP39656 456 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 ISL1P61371 349 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 TIGITQ495A1 244 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CYHR1Q6ZMK1 362 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 TGIF2LXQ8IUE1 241 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 SIGLEC11Q96RL6 698 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CMC2Q9NRP2 79 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 DUSP22Q9NRW4 184 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 NDRG3Q9UGV2 375 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 Q56UQ5 140 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 Q7L0L9 218 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 ISL2Q96A47 359 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 MRGPRX1Q96LB2 322 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 KLF13Q9Y2Y9 288 aaPredicted RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 GFYI3L273 518 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 GABRB1P18505 474 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 PSMB6P28072 239 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 BTF3L4Q96K17 158 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 SIGLEC1Q9BZZ2 1709 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 PIGMQ9H3S5 423 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 UPK1AO00322 258 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 OXGR1Q96P68 337 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 ARHGDIGQ99819 225 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 GAL3ST2Q9H3Q3 398 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 ADRB1P08588 477 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 OR5H8P0DN80 308 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CCL2P13500 99 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CLEC9AQ6UXN8 241 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 GALNT16Q8N428 558 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 LAT2Q9GZY6 243 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 R4GMQ9 66 aa12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
COL4A1-201ENST00000375820 CLEC18AA5D8T8 446 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 CTSLP07711 333 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 GIPP09681 153 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 SPNP16150 400 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 BPIFB3P59826 476 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 COMMD1Q8N668 190 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 CLEC18CQ8NCF0 446 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 BLNKQ8WV28 456 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 CROCCQ5TZA2 2017 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 SHBQ15464 509 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 DUS3LQ96G46 650 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms