RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 OCLNQ16625 522 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 SLC25A30Q5SVS4 291 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF322Q6U7Q0 402 aaPredicted RBP13.49□□□□□ -0.25
C11orf88-202ENST00000375618 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.49□□□□□ -0.25
C11orf88-202ENST00000375618 OR13G1Q8NGZ3 307 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 CLDND2Q8NHS1 167 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
C11orf88-202ENST00000375618 ASB17Q8WXJ9 295 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 SIGLEC11Q96RL6 698 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 EGLN1Q9GZT9 426 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 TMEM100Q9NV29 134 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 IL19Q9UHD0 177 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 ABCA2Q9BZC7 2435 aa13.49□□□□□ -0.25
C11orf88-202ENST00000375618 FN1P02751 2386 aaKnown RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 A0A1W2PQL4 384 aaPredicted RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 INAFM1C9JVW0 142 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF670-ZNF695F2Z2N8 137 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 SLC16A6O15403 523 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ACKR3P25106 362 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 MMP16P51512 607 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 CHN2P52757 468 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF85Q03923 595 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 HFEQ30201 348 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 DEGS2Q6QHC5 323 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF679Q8IYX0 411 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 OR52H1Q8NGJ2 320 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 RHOXF1Q8NHV9 184 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF420Q8TAQ5 688 aaPredicted RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 APH1BQ8WW43 257 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 SPRYD4Q8WW59 207 aaPredicted RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 MSI2Q96DH6 328 aaKnown RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 OR10A2Q9H208 303 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 SMPD3Q9NY59 655 aaPredicted RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 TMEM14AQ9Y6G1 99 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ABCA1O95477 2261 aa13.48□□□□□ -0.25
C11orf88-202ENST00000375618 ANK3Q12955 4377 aaKnown RBP13.48□□□□□ -0.25
C11orf88-202ENST00000375618 J3QRE1 110 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 CASQ2O14958 399 aaPredicted RBP13.47□□□□□ -0.25
C11orf88-202ENST00000375618 CLIC3O95833 236 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 APOC1P02654 83 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
C11orf88-202ENST00000375618 TNFSF4P23510 183 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 GSK3AP49840 483 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 LMO4P61968 165 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 PRAMEF6Q5VXH4 476 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 KCTD18Q6PI47 426 aaPredicted RBP13.47□□□□□ -0.25
C11orf88-202ENST00000375618 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
C11orf88-202ENST00000375618 RNFT2Q96EX2 444 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 MNTQ99583 582 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 MROQ9BYG7 248 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 NIPAL2Q9H841 368 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 GCM1Q9NP62 436 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 YAE1D1Q9NRH1 226 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 TMEM106BQ9NUM4 274 aa13.47□□□□□ -0.25
C11orf88-202ENST00000375618 DYSFO75923 2080 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 LOC100289279A0A1B0GTE1 492 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 TMEM269A0A1B0GVZ9 245 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 FAM157AC9JC47 383 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 CLDN25C9JDP6 229 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF254O75437 659 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 IGLV3-1P01715 115 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 OR2T7P0C7T2 308 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 DCTDP32321 178 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 MTNR1AP48039 350 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 RIDAP52758 137 aaKnown RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF91Q05481 1191 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 TMED1Q13445 227 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 OR8B8Q15620 311 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 MPPED2Q15777 294 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 OGFRL1Q5TC84 451 aaPredicted RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 WDR86Q86TI4 376 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 OR2T27Q8NH04 317 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 RFKQ969G6 155 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 C1orf159Q96HA4 380 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 ADAT1Q9BUB4 502 aaKnown RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 FGF23Q9GZV9 251 aaPredicted RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 PBOV1Q9GZY1 135 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 G6PC2Q9NQR9 355 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 MRPL15Q9P015 296 aaKnown RBP13.46□□□□□ -0.25
C11orf88-202ENST00000375618 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 RHBDD3Q9Y3P4 386 aa13.46□□□□□ -0.25
C11orf88-202ENST00000375618 WBP4O75554 376 aaKnown RBP13.45□□□□□ -0.26
C11orf88-202ENST00000375618 CYB5R3P00387 301 aaPredicted RBP13.45□□□□□ -0.26
C11orf88-202ENST00000375618 IGHV2-70P01814 119 aa13.45□□□□□ -0.26
C11orf88-202ENST00000375618 TTRP02766 147 aa13.45□□□□□ -0.26
C11orf88-202ENST00000375618 TNFRSF1AP19438 455 aa13.45□□□□□ -0.26
C11orf88-202ENST00000375618 CD200P41217 278 aa13.45□□□□□ -0.26
C11orf88-202ENST00000375618 EGR3Q06889 387 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms