RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 UFD1Q92890 307 aa17.72■□□□□ 0.43
NELFE-202ENST00000375429 CMBLQ96DG6 245 aa17.72■□□□□ 0.43
NELFE-202ENST00000375429 RGCCQ9H4X1 137 aa17.72■□□□□ 0.43
NELFE-202ENST00000375429 TUBG2Q9NRH3 451 aa17.72■□□□□ 0.43
NELFE-202ENST00000375429 CISD1Q9NZ45 108 aaKnown RBP17.72■□□□□ 0.43
NELFE-202ENST00000375429 CTAG2O75638 210 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 TFAP2AP05549 437 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 UBCP0CG48 685 aaKnown RBP17.71■□□□□ 0.43
NELFE-202ENST00000375429 FAM3AP98173 230 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 GPR50Q13585 617 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 SSX1Q16384 188 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 ZNF718Q3SXZ3 478 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 TMEM255AQ5JRV8 349 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 TMEM244Q5VVB8 128 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 COMMD2Q86X83 199 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 OR10AC1Q8NH08 325 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 AKAP1Q92667 903 aaKnown RBP eCLIP17.71■□□□□ 0.43
NELFE-202ENST00000375429 COMMD4Q9H0A8 199 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 ZNF442Q9H7R0 627 aa17.71■□□□□ 0.43
NELFE-202ENST00000375429 GCN1Q92616 2671 aaKnown RBP17.71■□□□□ 0.43
NELFE-202ENST00000375429 UTP20O75691 2785 aaKnown RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 CD1AP06126 327 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 ZNF250P15622 560 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 LIPAP38571 399 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 RPS23P62266 143 aaKnown RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 PSG7Q13046 419 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 TNK1Q13470 666 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 ADIPOQQ15848 244 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 MBNL2Q5VZF2 373 aaKnown RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 PGAP1Q75T13 922 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 MRPL21Q7Z2W9 205 aaKnown RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 LRP11Q86VZ4 500 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 ZNF295-AS1Q8N0V1 137 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 PLPP7Q8NBV4 271 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 HAVCR1Q96D42 359 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 FAM71F1Q96KD3 344 aaPredicted RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 ZNF391Q9UJN7 358 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 ZNF281Q9Y2X9 895 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 CMAHPQ9Y471 501 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 hCG_38984A0A1B0GV85 526 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 LOC107986453A0A1B0GWG9 222 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 RAC2P15153 192 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 CCL1P22362 96 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 OR51A4Q8NGJ6 313 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 SYNPRQ8TBG9 265 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 DUSP13Q9UII6 198 aa17.7■□□□□ 0.42
NELFE-202ENST00000375429 SF3B6Q9Y3B4 125 aaKnown RBP17.7■□□□□ 0.42
NELFE-202ENST00000375429 A0A1B0GVI7 797 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 SYT7O43581 403 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 OR4A8P0C604 315 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 ACHEP22303 614 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 CFL1P23528 166 aaKnown RBP17.69■□□□□ 0.42
NELFE-202ENST00000375429 GCH1P30793 250 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 MAGEB1P43366 347 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 GSK3AP49840 483 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 RPS11P62280 158 aaKnown RBP eCLIP17.69■□□□□ 0.42
NELFE-202ENST00000375429 ALKBH6Q3KRA9 238 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 HIST2H2BCQ6DN03 193 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 OR2T2Q6IF00 324 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 Q6ZSR3 168 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 DOK3Q7L591 496 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 OR13C5Q8NGS8 318 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 OR14K1Q8NGZ2 314 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 MRPL24Q96A35 216 aaKnown RBP17.69■□□□□ 0.42
NELFE-202ENST00000375429 TMIGD2Q96BF3 282 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 MRPL37Q9BZE1 423 aaKnown RBP17.69■□□□□ 0.42
NELFE-202ENST00000375429 SCOCQ9UIL1 159 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 HHLA2Q9UM44 414 aa17.69■□□□□ 0.42
NELFE-202ENST00000375429 H3BSA7 217 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 CCRL2O00421 344 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 LMX1BO60663 402 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 ACKR3P25106 362 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 APOBEC3AP31941 199 aaPredicted RBP17.68■□□□□ 0.42
NELFE-202ENST00000375429 ALDH3B2P48448 385 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 TMEM203Q969S6 136 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 DHRS9Q9BPW9 319 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 SYT3Q9BQG1 590 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 TMED9Q9BVK6 235 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 OPA3Q9H6K4 179 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 MYEF2Q9P2K5 600 aaKnown RBP17.68■□□□□ 0.42
NELFE-202ENST00000375429 V9GYS6 101 aa17.68■□□□□ 0.42
NELFE-202ENST00000375429 IGLV3-9A0A075B6K5 115 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 LOC390937A0A1W2PQ73 354 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 GGT3PA6NGU5 568 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 VSTM5A8MXK1 200 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 DHRS3O75911 302 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 RPS25P62851 125 aaKnown RBP17.67■□□□□ 0.42
NELFE-202ENST00000375429 OR8B8Q15620 311 aa17.67■□□□□ 0.42
NELFE-202ENST00000375429 PURGQ9UJV8 347 aaKnown RBP17.67■□□□□ 0.42
NELFE-202ENST00000375429 CD300LBA8K4G0 201 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 HS3ST1O14792 307 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 MTRF1O75570 445 aaKnown RBP17.66■□□□□ 0.42
NELFE-202ENST00000375429 IGHV3-13P01766 116 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 CD53P19397 219 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 KITLGP21583 273 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 SERPINF1P36955 418 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 MAP2K3P46734 347 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 YIF1BQ5BJH7 314 aa17.66■□□□□ 0.42
NELFE-202ENST00000375429 OR56B2PQ8NGI1 322 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms