RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MED6O75586 246 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 CLPSP04118 112 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SERPINA5P05154 406 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SFTA3P0C7M3 94 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 VSIG8P0DPA2 414 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NME2P22392 152 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 S100A10P60903 97 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 RAB5BP61020 215 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 FMODQ06828 376 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 C14orf28Q4W4Y0 310 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 AWAT2Q6E213 333 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF704Q6ZNC4 412 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ARHGEF39Q8N4T4 335 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 PTX4Q96A99 478 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 METTL8Q9H825 291 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 G6PC2Q9NQR9 355 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 GSKIPQ9P0R6 139 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 DHCR7Q9UBM7 475 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ARPC4-TTLL3A0A0A6YYG9 625 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 ACAA1P09110 424 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 GP1BBP13224 206 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 IL12BP29460 328 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TAS2R31P59538 309 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM244Q5VVB8 128 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 OR13C9Q8NGT0 318 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 NICN1Q9BSH3 213 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 LAT2Q9GZY6 243 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 ACKR4Q9NPB9 350 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TECTAO75443 2155 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 PRUNE2Q8WUY3 3088 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 LOC390937A0A1W2PQ73 354 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 DBX1A6NMT0 343 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 LRP3O75074 770 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 H2BFMP0C1H6 154 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 HLA-DOBP13765 273 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 CD80P33681 288 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 SLC6A8P48029 635 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 PNLIPRP3Q17RR3 467 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM128Q5BJH2 165 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 ETV3LQ6ZN32 361 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 OR51F2Q8NH61 342 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 C14orf79Q96F83 325 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 CDC6Q99741 560 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 VSX1Q9NZR4 365 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM184BQ9Y519 407 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 CEP192Q8TEP8 1941 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TRBV6-7A0A0A0MS04 114 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 RNASEK-C17orf49H0YIS7 233 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 SSX5O60225 188 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 S100A9P06702 114 aaKnown RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 S100A6P06703 90 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 MPZP25189 248 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 CRABP1P29762 137 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 EMP2P54851 167 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 SLC37A1P57057 533 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 SMCO1Q147U7 214 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 EBPQ15125 230 aaKnown RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 FAM76BQ5HYJ3 339 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 HOGA1Q86XE5 327 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TERB2Q8NHR7 220 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM41AQ96HV5 264 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TBL1XR1Q9BZK7 514 aa9.86□□□□□ -0.83
CCDC40-203ENST00000374877 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
CCDC40-203ENST00000374877 LINC00587B1AMM8 73 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 CAV2P51636 162 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 HSD17B7P56937 341 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SHBQ15464 509 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 CLEC18BQ6UXF7 455 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RBMS3Q6XE24 437 aaKnown RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 ANGPTL5Q86XS5 388 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SKA3Q8IX90 412 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 MAP3K3Q99759 626 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RAB33BQ9H082 229 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PCDHGA1Q9Y5H4 931 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 TMED7-TICAM2A0A0A6YYA0 188 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SYT7O43581 403 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 FBXO24O75426 580 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SRSF10O75494 262 aaKnown RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 NSA2O95478 260 aaKnown RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 MT-ATP6P00846 226 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 NAT2P11245 290 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RCC1P18754 421 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 LPAR6P43657 344 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RAB32Q13637 225 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 DEFB133Q30KQ1 61 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 C1orf140Q5VVS0 124 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 DRAM2Q6UX65 266 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SLC22A24Q8N4F4 322 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PTPMT1Q8WUK0 201 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 ADAT3Q96EY9 351 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 SULT4A1Q9BR01 284 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PCNX3Q9H6A9 2034 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RP1P56715 2156 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 HTR3BO95264 441 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 MPIG6BO95866 241 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 HEXAP06865 529 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms