RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
LDB3-204ENST00000372066 BEX2Q9BXY8 128 aa12.4□□□□□ -0.42
LDB3-204ENST00000372066 TMEM138Q9NPI0 162 aa12.4□□□□□ -0.42
LDB3-204ENST00000372066 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
LDB3-204ENST00000372066 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 MSR1P21757 451 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 PER3P56645 1201 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 GLYATL3Q5SZD4 288 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 SLC25A25Q6KCM7 469 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 LUZP2Q86TE4 346 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 BEST3Q8N1M1 668 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 GNRHR2Q96P88 292 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 NUDT16L1Q9BRJ7 211 aaKnown RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 GON7Q9BXV9 100 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 ATG5Q9H1Y0 275 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 NELFAQ9H3P2 528 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 RANBP3Q9H6Z4 567 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 PAQR5Q9NXK6 330 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 H3BSH0 61 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 NDUFB6O95139 128 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 APOC1P02654 83 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 OPN1LWP04000 364 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 IL5P05113 134 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 TMIGD3P0DMS9 266 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 CCL1P22362 96 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 EIF1AXP47813 144 aaKnown RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 RAC3P60763 192 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 FCN2Q15485 313 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 CARD17Q5XLA6 110 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 LINC00696Q6ZRV3 163 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 PGAP1Q75T13 922 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 SLC22A24Q8N4F4 322 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 JAGN1Q8N5M9 183 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 OR6N1Q8NGY5 312 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 GRPEL2Q8TAA5 225 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 JSRP1Q96MG2 331 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 METTL17Q9H7H0 456 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
LDB3-204ENST00000372066 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
LDB3-204ENST00000372066 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 GMDSO60547 372 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 RAMP1O60894 148 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 BPNT1O95861 308 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 LPLP06858 475 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 AKAIN1P0CW23 69 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 EDN3P14138 238 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 ZNF20P17024 532 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 RAB3AP20336 220 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 ZNF84P51523 738 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 EFNB2P52799 333 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 Q0VFX4 171 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 SF3B4Q15427 424 aaKnown RBP eCLIP12.38□□□□□ -0.43
LDB3-204ENST00000372066 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
LDB3-204ENST00000372066 FAM189A2Q15884 450 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 ACER2Q5QJU3 275 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 B3GNTL1Q67FW5 361 aaPredicted RBP12.38□□□□□ -0.43
LDB3-204ENST00000372066 MTFR2Q6P444 385 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 DOK3Q7L591 496 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 GJC3Q8NFK1 279 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 GCDHQ92947 438 aaPredicted RBP12.38□□□□□ -0.43
LDB3-204ENST00000372066 FGGYQ96C11 551 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 TMEM246Q9BRR3 403 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
LDB3-204ENST00000372066 ASH2LQ9UBL3 628 aa12.38□□□□□ -0.43
LDB3-204ENST00000372066 ITPR2Q14571 2701 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 A0A0J9YW62 118 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 SNRPGP15A8MWD9 76 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 DHHO43323 396 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 ALDOBP05062 364 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 GSTT2P0CG29 244 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 GSK3AP49840 483 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 B3GALT5-AS1P59052 145 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 SPOCK1Q08629 439 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 RIPPLY1Q0D2K3 151 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 MFAP5Q13361 173 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 SFRP4Q6FHJ7 346 aaPredicted RBP12.37□□□□□ -0.43
LDB3-204ENST00000372066 FAM180AQ6UWF9 173 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 OR1J2Q8NGS2 313 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 NOX3Q9HBY0 568 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
LDB3-204ENST00000372066 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
LDB3-204ENST00000372066 POLEQ07864 2286 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms