RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PPP1R14AQ96A00 147 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 CMTM5Q96DZ9 223 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 ZNF583Q96ND8 569 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 PNRC2Q9NPJ4 139 aaKnown RBP12.59□□□□□ -0.39
SSR4-204ENST00000370087 GMPR2Q9P2T1 348 aaKnown RBP12.59□□□□□ -0.39
SSR4-204ENST00000370087 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 CD300LBA8K4G0 201 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 ECDO95905 644 aaPredicted RBP12.58□□□□□ -0.4
SSR4-204ENST00000370087 LCATP04180 440 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 GRPP07492 148 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 PAX6P26367 422 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 CENPAP49450 140 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
SSR4-204ENST00000370087 TRAM2Q15035 370 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 ZNF730Q6ZMV8 503 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 TMPRSS11FQ6ZWK6 438 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 MBOAT2Q6ZWT7 520 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 OR2AE1Q8NHA4 323 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 ACOT11Q8WXI4 607 aaPredicted RBP12.58□□□□□ -0.4
SSR4-204ENST00000370087 SGCDQ92629 289 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 SEH1LQ96EE3 360 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 FAM46AQ96IP4 442 aaKnown RBP12.58□□□□□ -0.4
SSR4-204ENST00000370087 CCL13Q99616 98 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 NRIP3Q9NQ35 241 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.58□□□□□ -0.4
SSR4-204ENST00000370087 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
SSR4-204ENST00000370087 LOC100653049A0A140TA62 436 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 H3BUX3 64 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
SSR4-204ENST00000370087 MRASO14807 208 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 NDUFA2O43678 99 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 KRT34O76011 436 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 PPP1R3DO95685 299 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 LHBP01229 141 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 SELLP14151 372 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 KDELR2P33947 212 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 ZNF92Q03936 586 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 LY6EQ16553 131 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 PCK2Q16822 640 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 WDR38Q5JTN6 314 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 TEX36Q5VZQ5 186 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
SSR4-204ENST00000370087 WDR86Q86TI4 376 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 OR5R1Q8NH85 324 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 RORBQ92753 470 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 GPX7Q96SL4 187 aaPredicted RBP12.57□□□□□ -0.4
SSR4-204ENST00000370087 FNDC11Q9BVV2 318 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 MMP28Q9H239 520 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 TRIM36Q9NQ86 728 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 IER3IP1Q9Y5U9 82 aa12.57□□□□□ -0.4
SSR4-204ENST00000370087 hCG_1807616A0A1W2PRN6 198 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 MEIOCA2RUB1 952 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 A6NLC8 198 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 PTP4A3O75365 173 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 TFF1P04155 84 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 COX4I1P13073 169 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 AMY2BP19961 511 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 SELENOWP63302 87 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 MALLQ13021 153 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 CCDC197Q8NCU1 140 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 SLC26A10Q8NG04 563 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 OR8J3Q8NGG0 315 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 PITX2Q99697 317 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 ATF6BQ99941 703 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 EFCAB1Q9HAE3 211 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 AP3M1Q9Y2T2 418 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
SSR4-204ENST00000370087 TENM3Q9P273 2699 aa12.56□□□□□ -0.4
SSR4-204ENST00000370087 ADARB2-AS1A8MUL3 147 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 NDUFAB1O14561 156 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 ACOT8O14734 319 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 CHST1O43916 411 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 GMDSO60547 372 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 NDUFB2O95178 105 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 PAHP00439 452 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 IFNA14P01570 189 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 VSIG10L2P0DP72 767 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 PSKH1P11801 424 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 PRDX6P30041 224 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 GGT2P36268 569 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 GLYATL3Q5SZD4 288 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 FOXB2Q5VYV0 432 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 GPR139Q6DWJ6 353 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 HCP5Q6MZN7 132 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 ERICH5Q6P6B1 374 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 TSEN54Q7Z6J9 526 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms