RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 GGT3PA6NGU5 568 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 ZAR1LA6NP61 321 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 GMDSO60547 372 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 FSTL3O95633 263 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 PNPP00491 289 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 ANXA2P07355 339 aaKnown RBP15.9■□□□□ 0.14
CKS1B-203ENST00000368439 FCGR1AP12314 374 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 ALOX5APP20292 161 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 MDH2P40926 338 aaKnown RBP15.9■□□□□ 0.14
CKS1B-203ENST00000368439 HCCSP53701 268 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 SEC61A1P61619 476 aaKnown RBP15.9■□□□□ 0.14
CKS1B-203ENST00000368439 FAM3AP98173 230 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 PRAMEF6Q5VXH4 476 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 C12orf73Q69YU5 71 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 FAHD2BQ6P2I3 314 aaPredicted RBP15.9■□□□□ 0.14
CKS1B-203ENST00000368439 SLC16A9Q7RTY1 509 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 ZDHHC13Q8IUH4 622 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 OR56B2PQ8NGI1 322 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 THEM6Q8WUY1 208 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 FAHD2AQ96GK7 314 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 DNAJC27Q9NZQ0 273 aa15.9■□□□□ 0.14
CKS1B-203ENST00000368439 POLR3KQ9Y2Y1 108 aaPredicted RBP15.9■□□□□ 0.14
CKS1B-203ENST00000368439 hCG_38984A0A1B0GV85 526 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 M0R129 80 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 TBX1O43435 398 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 CIB2O75838 187 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 APOC1P02654 83 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 H2BFMP0C1H6 154 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 SRP14P37108 136 aaKnown RBP15.89■□□□□ 0.13
CKS1B-203ENST00000368439 RPS7P62081 194 aaKnown RBP15.89■□□□□ 0.13
CKS1B-203ENST00000368439 LCN2P80188 198 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 OR8G1Q15617 311 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 MPPED2Q15777 294 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 FAM201AQ5SY85 155 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 FAM57BQ71RH2 274 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 BCDIN3DQ7Z5W3 292 aaKnown RBP15.89■□□□□ 0.13
CKS1B-203ENST00000368439 KLHL36Q8N4N3 616 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 DVL3Q92997 716 aaPredicted RBP15.89■□□□□ 0.13
CKS1B-203ENST00000368439 ERGIC1Q969X5 290 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 ADAT1Q9BUB4 502 aaKnown RBP15.89■□□□□ 0.13
CKS1B-203ENST00000368439 SEMA6AQ9H2E6 1030 aa15.89■□□□□ 0.13
CKS1B-203ENST00000368439 PPIAL4EA0A075B759 164 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 PPIAL4CA0A0B4J2A2 164 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 A0A0G2JMP0 313 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 A0A0X1KG70 313 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 CEACAM18A8MTB9 384 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 A8MXK9 166 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 PRR32B1ATL7 298 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 PPIAL4DF5H284 164 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 ZNF205O95201 554 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 WNT2P09544 360 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 PPIAL4FP0DN26 164 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 DDOSTP39656 456 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 ACTR3P61158 418 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 AADACL4Q5VUY2 407 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 LRRN1Q6UXK5 716 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 MUC20Q8N307 709 aaPredicted RBP15.88■□□□□ 0.13
CKS1B-203ENST00000368439 OR4M2Q8NGB6 313 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 OR52H1Q8NGJ2 320 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 CENPNQ96H22 339 aaPredicted RBP15.88■□□□□ 0.13
CKS1B-203ENST00000368439 REEP6Q96HR9 211 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 CIB1Q99828 191 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 YIPF3Q9GZM5 350 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 SP140LQ9H930 580 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 PCDHB10Q9UN67 800 aa15.88■□□□□ 0.13
CKS1B-203ENST00000368439 NOP16Q9Y3C1 178 aaKnown RBP15.88■□□□□ 0.13
CKS1B-203ENST00000368439 LRRC30A6NM36 301 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 TRAPPC2LH3BP13 241 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 J3QLI3 93 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 FAM20BO75063 409 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 FOXH1O75593 365 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 HOXA4Q00056 320 aaPredicted RBP15.87■□□□□ 0.13
CKS1B-203ENST00000368439 SRSF2Q01130 221 aaKnown RBP15.87■□□□□ 0.13
CKS1B-203ENST00000368439 TIGD6Q17RP2 521 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 ZNF404Q494X3 552 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 DCAF12L2Q5VW00 463 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 TCEANCQ8N8B7 351 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 PLPP7Q8NBV4 271 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 TMEM163Q8TC26 289 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 PYDC1Q8WXC3 89 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 TMEM246Q9BRR3 403 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 BRD7Q9NPI1 651 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 MMP26Q9NRE1 261 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 UFSP2Q9NUQ7 469 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 OPN4Q9UHM6 478 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 OAZ3Q9UMX2 235 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 COPS3Q9UNS2 423 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 LRP12Q9Y561 859 aa15.87■□□□□ 0.13
CKS1B-203ENST00000368439 LOC105371242A0A075B767 164 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 RNF212BA8MTL3 300 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 H3BNX3 289 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 MRPL3P09001 348 aaKnown RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 GATA3P23771 443 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 POLR2IP36954 125 aaKnown RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 GSK3AP49840 483 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 PSMA6P60900 246 aaKnown RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 OR8B8Q15620 311 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 KRTAP24-1Q3LI83 254 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 LCN1P1Q5VSP4 162 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 NXNL2Q5VZ03 156 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms