RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 LIN37Q96GY3 246 aaPredicted RBP7.55□□□□□ -1.2
PTPRK-206ENST00000368215 MOB1AQ9H8S9 216 aa7.55□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF286AQ9HBT8 521 aa7.55□□□□□ -1.2
PTPRK-206ENST00000368215 OR5H15A6NDH6 313 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 LIPT2A6NK58 231 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ANKRD30BLA7E2S9 258 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 LGALS8O00214 317 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 BPNT1O95861 308 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 PNPP00491 289 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CELA2AP08217 269 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 MGMTP16455 207 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 IKZF1Q13422 519 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 LINC01590Q5TEZ4 76 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 WDR74Q6RFH5 385 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ADIPOR1Q96A54 375 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SCMH1Q96GD3 660 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 UBL7Q96S82 380 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 GDF15Q99988 308 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF416Q9BWM5 594 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ARRDC1-AS1Q9H2J1 176 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF768Q9H5H4 540 aaKnown RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF275Q9NSD4 429 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF230Q9UIE0 474 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CSAG2Q9Y5P2 127 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 IGHV5-10-1A0A0J9YXX1 117 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 A0A1W2PR77 199 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 TRAPPC2LH3BP13 241 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SPRY1O43609 319 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 TSPAN2O60636 221 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 IGHEP01854 428 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CD63P08962 238 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 M6PRP20645 277 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 RGS19P49795 217 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CLDN15P56746 228 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SHBQ15464 509 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF362Q5T0B9 420 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 LYPD8Q6UX82 237 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 PRSS35Q8N3Z0 413 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CCDC71LQ8N9Z2 235 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 OR4D10Q8NGI6 311 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 NINJ1Q92982 152 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CLCC1Q96S66 551 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CRLF2Q9HC73 371 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 A0A087WV48 116 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 GSTZ1O43708 216 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 UPK3AO75631 287 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 IL5P05113 134 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 NME2P22392 152 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 OMGP23515 440 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 OR3A4PP47883 348 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 GAS1P54826 345 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 TOR2AQ5JU69 321 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 GALNT16Q8N428 558 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 PXT1Q8NFP0 134 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ARPC5LQ9BPX5 153 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 PARP12Q9H0J9 701 aaKnown RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SULT1C2O00338 296 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CBR3O75828 277 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 TSPAN15O95858 294 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CD96P40200 585 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 RBP2P50120 134 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 RAG2P55895 527 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 CEACAM16Q2WEN9 425 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ELFN2Q5R3F8 820 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 FIP1L1Q6UN15 594 aaKnown RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 VASH2Q86V25 355 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 EXD3Q8N9H8 876 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SUMF1Q8NBK3 374 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 SLC25A38Q96DW6 304 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ARHGAP5-AS1Q96IT6 56 aa7.54□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF2Q9BSG1 426 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-206ENST00000368215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.23e-6■■■■■ 36.9
PTPRK-206ENST00000368215 TMEM200CA6NKL6 621 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 H3BMH7 237 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 K7EPK0 472 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 RGS13O14921 159 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 ZNF728P0DKX0 622 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 FKBP2P26885 142 aaKnown RBP7.53□□□□□ -1.2
PTPRK-206ENST00000368215 DHRS2Q13268 280 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 CATSPERDQ86XM0 798 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 C20orf196Q8IYI0 205 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 CARFQ8N187 725 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 FAM71E2Q8N5Q1 922 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 OR4D6Q8NGJ1 314 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 CNTNAP3BQ96NU0 1288 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 CHST6Q9GZX3 395 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 ADAM19Q9H013 955 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 KIF26BQ2KJY2 2108 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 TP53BP1Q12888 1972 aaPredicted RBP7.53□□□□□ -1.2
PTPRK-206ENST00000368215 MASP2O00187 686 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 CTDSPLO15194 276 aa7.53□□□□□ -1.2
PTPRK-206ENST00000368215 MED6O75586 246 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms