RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 WDR38Q5JTN6 314 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 UNQ9370/PRO34162Q6UXP9 181 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 LINGO2Q7L985 606 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CEACAM19Q7Z692 300 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CATSPERDQ86XM0 798 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 SNX29P2Q8IUI4 249 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 PRSS35Q8N3Z0 413 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 CLRN3Q8NCR9 226 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 THRSPQ92748 146 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 MARC2Q969Z3 335 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 FOXB1Q99853 325 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 PNRC2Q9NPJ4 139 aaKnown RBP10.59□□□□□ -0.71
USF1-203ENST00000368021 CENPMQ9NSP4 180 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 SHANK1Q9Y566 2161 aa10.59□□□□□ -0.71
USF1-203ENST00000368021 ZNF587BE7ETH6 402 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 RER1O15258 196 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ORC5O43913 435 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ARL6IP5O75915 188 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 PNPP00491 289 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 UCHL1P09936 223 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 UQCRFS1P47985 274 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 RAB13P51153 203 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 GRB2P62993 217 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 MRPL49Q13405 166 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 Q5BKY6 102 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF627Q7L945 461 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 P4HA3Q7Z4N8 544 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 NRARPQ7Z6K4 114 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 SYT9Q86SS6 491 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 TPRA1Q86W33 373 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 OR8H2Q8N162 312 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF680Q8NEM1 530 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 RGP1Q92546 391 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 WNT2BQ93097 391 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 RBM14Q96PK6 669 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 SLC7A10Q9NS82 523 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 HSPB11Q9Y547 144 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 TRAV1-2A0A0B4J238 106 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 TRBV5-5A0A0J9YX44 114 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 TMEM269A0A1B0GVZ9 245 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF879B4DU55 563 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 CASKO14936 926 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 S100A8P05109 93 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 CTSSP25774 331 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 MAPK3P27361 379 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 KIR3DL2P43630 455 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 GUSBP1Q15486 140 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 EIF2S3LQ2VIR3 472 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 Q499Y3 187 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 KLHL24Q6TFL4 600 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 ABHD12BQ7Z5M8 362 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF100Q8IYN0 542 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 SLC22A24Q8N4F4 322 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 EIF4E3Q8N5X7 224 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 ZNF676Q8N7Q3 588 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 OR4D10Q8NGI6 311 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 OR13C5Q8NGS8 318 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 OR14A2Q96R54 314 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 C12orf57Q99622 126 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 SHARPINQ9H0F6 387 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 PPIL3Q9H2H8 161 aaKnown RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 MOB1AQ9H8S9 216 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 G6PC2Q9NQR9 355 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 SNTG1Q9NSN8 517 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 MALT1Q9UDY8 824 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 NDRG3Q9UGV2 375 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 FBXL3Q9UKT7 428 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
USF1-203ENST00000368021 UBR5O95071 2799 aaPredicted RBP10.58□□□□□ -0.72
USF1-203ENST00000368021 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 ZGRF1Q86YA3 2104 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 IQCMA0A1B0GVH7 501 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 SHISA3A0PJX4 238 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 DVL2O14641 736 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 ZNHIT1O43257 154 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 FARS2O95363 451 aaKnown RBP10.57□□□□□ -0.72
USF1-203ENST00000368021 RAF1P04049 648 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 ISG15P05161 165 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 B4GALT1P15291 398 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 GNLYP22749 145 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 PTGER4P35408 488 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 PSMA6P60900 246 aaKnown RBP10.57□□□□□ -0.72
USF1-203ENST00000368021 PCBD1P61457 104 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 MXD1Q05195 221 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 MFGE8Q08431 387 aaPredicted RBP10.57□□□□□ -0.72
USF1-203ENST00000368021 ACSF3Q4G176 576 aaPredicted RBP10.57□□□□□ -0.72
USF1-203ENST00000368021 HES5Q5TA89 166 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 OR2A2Q6IF42 318 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
USF1-203ENST00000368021 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms