RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 KRTAP4-6Q9BYQ5 205 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 SLC22A4Q9H015 551 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 SDR39U1Q9NRG7 319 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 SLAMF8Q9P0V8 285 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 NOP16Q9Y3C1 178 aaKnown RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 TEX13CA0A0J9YWL9 993 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 PAICSP22234 425 aaKnown RBP11.76□□□□□ -0.53
VAMP4-202ENST00000367740 LSM6P62312 80 aaKnown RBP11.76□□□□□ -0.53
VAMP4-202ENST00000367740 PLA1AQ53H76 456 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 RABL3Q5HYI8 236 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 PGAP1Q75T13 922 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 DYNAPQ8N1N2 210 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 TMEM239Q8WW34 195 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 HDHD2Q9H0R4 259 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 ADA2Q9NZK5 511 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 VAPAQ9P0L0 249 aa11.76□□□□□ -0.53
VAMP4-202ENST00000367740 A0A1W2PQ09 198 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 F2RL2O00254 374 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 ALDOBP05062 364 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 CHATP28329 748 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 HIST1H3AP68431 136 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 BLMHQ13867 455 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 KRTAP27-1Q3LI81 207 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 HIST2H3PS2Q5TEC6 136 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 STUMQ69YW2 141 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 HIST2H3AQ71DI3 136 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 DUS3LQ96G46 650 aaKnown RBP11.75□□□□□ -0.53
VAMP4-202ENST00000367740 PRR25Q96S07 402 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 MCRIP2Q9BUT9 160 aaKnown RBP11.75□□□□□ -0.53
VAMP4-202ENST00000367740 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
VAMP4-202ENST00000367740 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
VAMP4-202ENST00000367740 TRBV5-3A0A0A0MS03 114 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 M0QX08 132 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 RAMP3O60896 148 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 VIMP08670 466 aaKnown RBP11.74□□□□□ -0.53
VAMP4-202ENST00000367740 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 GPX2P18283 190 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 PPIBP23284 216 aaKnown RBP11.74□□□□□ -0.53
VAMP4-202ENST00000367740 GSK3BP49841 420 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 FHL1Q13642 323 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 MESTQ5EB52 335 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 KHDC1LQ5JSQ8 128 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 MRPL21Q7Z2W9 205 aaKnown RBP11.74□□□□□ -0.53
VAMP4-202ENST00000367740 LHFPL4Q7Z7J7 247 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 WDR86Q86TI4 376 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 C11orf53Q8IXP5 236 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 MNS1Q8NEH6 495 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
VAMP4-202ENST00000367740 LGALS13Q9UHV8 139 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 LHFPL6Q9Y693 200 aa11.74□□□□□ -0.53
VAMP4-202ENST00000367740 TRAV27A0A087WT01 109 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 H0YAE9 185 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 TFF1P04155 84 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 IL5RAQ01344 420 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 MALLQ13021 153 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 ATPAF1Q5TC12 328 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-202ENST00000367740 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 KRT77Q7Z794 578 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 NAA40Q86UY6 237 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 GLB1L2Q8IW92 636 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 MKXQ8IYA7 352 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 ELL3Q9HB65 397 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-202ENST00000367740 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
VAMP4-202ENST00000367740 SLC25A10Q9UBX3 287 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-202ENST00000367740 RPS6KA6Q9UK32 745 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 PITPNC1Q9UKF7 332 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 COA3Q9Y2R0 106 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-202ENST00000367740 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 MED31Q9Y3C7 131 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 ADAM18Q9Y3Q7 739 aa11.73□□□□□ -0.53
VAMP4-202ENST00000367740 BIRC5O15392 142 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 ANOS1P23352 680 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 THBS3P49746 956 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 DGUOKQ16854 277 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 CORO6Q6QEF8 472 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 CENPVQ7Z7K6 275 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-202ENST00000367740 MICU2Q8IYU8 434 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 GJC3Q8NFK1 279 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 RPS4Y2Q8TD47 263 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 TAMM41Q96BW9 452 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
VAMP4-202ENST00000367740 PRSS37A4D1T9 235 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
VAMP4-202ENST00000367740 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
VAMP4-202ENST00000367740 FAM90A8PA6NJQ4 464 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 TRPC5OSA6NMA1 111 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 F5H5K5 113 aa11.71□□□□□ -0.53
VAMP4-202ENST00000367740 IMPA2O14732 288 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms