RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PCK2Q16822 640 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 SEH1LQ96EE3 360 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZDBF2Q9HCK1 2354 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 BLACEA4D250 179 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 SIGLEC6O43699 453 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF205O95201 554 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZIC2O95409 532 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 NGFRP08138 427 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 KCNJ3P48549 501 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 PLP2Q04941 152 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 PDCD1Q15116 288 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 C4orf17Q53FE4 359 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 KIAA0895LQ68EN5 471 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 CYB5R1Q9UHQ9 305 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 THBS2P35442 1172 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 HTR5AP47898 357 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 RAB13P51153 203 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 EFNA3P52797 238 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 RPS15P62841 145 aaKnown RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 MAGT1Q9H0U3 335 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF576Q9H609 170 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 PADI1Q9ULC6 663 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 MMP24Q9Y5R2 645 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 HEATR5BQ9P2D3 2071 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 KIF26BQ2KJY2 2108 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 OR2G3Q8NGZ4 309 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ANKRD9Q96BM1 317 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF845Q96IR2 970 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 AMELYQ99218 206 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 C8orf33Q9H7E9 229 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF286AQ9HBT8 521 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ZFP92A6NM28 416 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 ZFAND5O76080 213 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 JTBO76095 146 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 CD37P11049 281 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 PLGLB1Q02325 96 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 GUCA2BQ16661 112 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 HIST2H3AQ71DI3 136 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 CLEC1AQ8NC01 280 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 ANKRD36A6QL64 1941 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 MSTNO14793 375 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 IGKV1D-16P01601 117 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 TK1P04183 234 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 RPL7L1Q6DKI1 246 aaKnown RBP12.47□□□□□ -0.41
COL6A1-201ENST00000361866 C2orf50Q96LR7 162 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 TMPRSS13Q9BYE2 586 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 FAM86C1Q9NVL1 165 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 GDF2Q9UK05 429 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-201ENST00000361866 CYR61O00622 381 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 OR2C1O95371 312 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 FAHP16930 419 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 RAB5CP51148 216 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-201ENST00000361866 INPP5JQ15735 1006 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-201ENST00000361866 CLEC12BQ2HXU8 276 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 CHST11Q9NPF2 352 aa12.47□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF98A6NK75 572 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 A6NLC8 198 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 ST8SIA3O43173 380 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 OTX2P32243 289 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 TFF2Q03403 129 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 VSTM2LQ96N03 204 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 PAPOLGQ9BWT3 736 aaKnown RBP12.46□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF724A8MTY0 619 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 CD79AP11912 226 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 ADRA2CP18825 462 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.41
COL6A1-201ENST00000361866 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 KISS1RQ969F8 398 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-201ENST00000361866 MMACHCQ9Y4U1 282 aa12.46□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM184BQ9Y519 407 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-201ENST00000361866 SPINT1O43278 529 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 F2RL1P55085 397 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 PPIAP62937 165 aaKnown RBP12.46□□□□□ -0.42
COL6A1-201ENST00000361866 MPPED2Q15777 294 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 TMEM123Q8N131 208 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms