RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SLC29A4Q7RTT9 530 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 GRINAQ7Z429 371 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 NUBPLQ8TB37 319 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ARHGAP5-AS1Q96IT6 56 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ZNF581Q9P0T4 197 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 POLR1DQ9Y2S0 133 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 IGHV1OR15-9A0A0B4J2B8 117 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 CFPP27918 469 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 ARL4DP49703 201 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 TMEM50BP56557 158 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 TGIF1Q15583 401 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 NKAPLQ5M9Q1 402 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 HAGHLQ6PII5 290 aaPredicted RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 TMEM17Q86X19 198 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 PIK3IP1Q96FE7 263 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 PRRT1Q99946 306 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 SCPEP1Q9HB40 452 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 TLCD2A6NGC4 264 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 MELTFP08582 738 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 PSMB6P28072 239 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 S100A10P60903 97 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 FGL1Q08830 312 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 PABPC1L2AQ5JQF8 200 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 H3F3CQ6NXT2 135 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 SMIM3Q9BZL3 60 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ESRP2Q9H6T0 727 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 CYTL1Q9NRR1 136 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ASH2LQ9UBL3 628 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 COPS7AQ9UBW8 275 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 GLS2Q9UI32 602 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 PURGQ9UJV8 347 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 TMEM127O75204 238 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 MT-ATP6P00846 226 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 KNG1P01042 644 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 SLC25A4P12235 298 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 FBLP22087 321 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 CRABP1P29762 137 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 SGCAQ16586 387 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 SLC38A9Q8NBW4 561 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ZNF248Q8NDW4 579 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 LPAR5Q9H1C0 372 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 SLC6A15Q9H2J7 730 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 RAB22AQ9UL26 194 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 RELNP78509 3460 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 LINC01387J3KSC0 135 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 SFTPDP35247 375 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 KCNJ3P48549 501 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 CSNK1EP49674 416 aaKnown RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 CLEC18BQ6UXF7 455 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 ZNF704Q6ZNC4 412 aaPredicted RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 OR1N1Q8NGS0 311 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 FBXO17Q96EF6 278 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 CCNL2Q96S94 520 aaPredicted RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 BDP1A6H8Y1 2624 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 C9JQL5 133 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 FBXO24O75426 580 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 CRTAPO75718 401 aaPredicted RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 IL2RAP01589 272 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 SERPINA5P05154 406 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 FASLGP48023 281 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 SUPT4H1P63272 117 aaKnown RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 ZNF345Q14585 488 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 ZNF585AQ6P3V2 769 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 HDHD3Q9BSH5 251 aaPredicted RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 GPR84Q9NQS5 396 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 MLXQ9UH92 298 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 LHFPL6Q9Y693 200 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 RHPN2P1A8MT19 583 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 NDUFA2O43678 99 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 RAB3AP20336 220 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 NME2P22392 152 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 DHPSP49366 369 aaPredicted RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 AIMP2Q13155 320 aaKnown RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 TDGQ13569 410 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 RAB32Q13637 225 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 SHBQ15464 509 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 HFEQ30201 348 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 PGAP1Q75T13 922 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 OR10H5Q8NGA6 315 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 RNF133Q8WVZ7 376 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 DNTTIP1Q9H147 329 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 SLC22A11Q9NSA0 550 aa9.36□□□□□ -0.91
SMC3-201ENST00000361804 MRPS28Q9Y2Q9 187 aaKnown RBP9.36□□□□□ -0.91
SMC3-201ENST00000361804 IGKV1D-8A0A087WSZ0 117 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 SFTPBP07988 381 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 HCKP08631 526 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNF17P17021 662 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 MEF2DQ14814 521 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 MST1LQ2TV78 715 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 TMEM244Q5VVB8 128 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 OR2A2Q6IF42 318 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 NUP54Q7Z3B4 507 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms