RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 APOBEC1P41238 236 aaKnown RBP6.46□□□□□ -1.37
CLCN3-202ENST00000360642 FBXW4P57775 412 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 STARD6P59095 220 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 C17orf67Q0P5P2 114 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 EXOSC2Q13868 293 aaKnown RBP6.46□□□□□ -1.37
CLCN3-202ENST00000360642 SHISA6Q6ZSJ9 500 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 TMPRSS9Q7Z410 1059 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 ANKRD37Q7Z713 158 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 OR8H3Q8N146 312 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 FTMTQ8N4E7 242 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 SLC38A9Q8NBW4 561 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 CLEC1AQ8NC01 280 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 NUBPLQ8TB37 319 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 GPX8Q8TED1 209 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 ARL5BQ96KC2 179 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 DPCDQ9BVM2 203 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-202ENST00000360642 RHBDD3Q9Y3P4 386 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 MRPS18BQ9Y676 258 aaKnown RBP6.46□□□□□ -1.37
CLCN3-202ENST00000360642 EXPH5Q8NEV8 1989 aa6.46□□□□□ -1.37
CLCN3-202ENST00000360642 TRAV18A0A075B6X5 111 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 A6NIZ1 184 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 BCAT2O15382 392 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-202ENST00000360642 TOX3O15405 576 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF208O43345 1280 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 MELTFP08582 738 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 GABRA1P14867 456 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 RAP1BP61224 184 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 RAP1AP62834 184 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 RIPPLY1Q0D2K3 151 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 SHBQ15464 509 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 CLLU1Q5K131 121 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 OR5M10Q6IEU7 315 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 NHLRC1Q6VVB1 395 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 ELOVL1Q9BW60 279 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 SAP30LQ9HAJ7 183 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 TAS2R4Q9NYW5 299 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 PTRH2Q9Y3E5 179 aaKnown RBP6.46□□□□□ -1.38
CLCN3-202ENST00000360642 CABIN1Q9Y6J0 2220 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 IGKV1D-43A0A0B4J1Z2 117 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 SULT1C2O00338 296 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 SNAPC5O75971 98 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 CFDP00746 253 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-202ENST00000360642 IFNA7P01567 189 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 AKAIN1P0CW23 69 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 FOSL2P15408 326 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 HTR2CP28335 458 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 PRSS3P35030 304 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 ARRB1P49407 418 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-202ENST00000360642 MFSD13AQ14CX5 517 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 GRK1Q15835 563 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 GLT8D1Q68CQ7 371 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 DEGS2Q6QHC5 323 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 ARSKQ6UWY0 536 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 RABEPKQ7Z6M1 372 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF248Q8NDW4 579 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 OR52B4Q8NGK2 314 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 GINS4Q9BRT9 223 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 CHIAQ9BZP6 476 aa6.46□□□□□ -1.38
CLCN3-202ENST00000360642 SPAG17Q6Q759 2223 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CNTRLQ7Z7A1 2325 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 A0A1W2PQ72 361 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 SH2D7A6NKC9 451 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CD2P06729 351 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CXCL2P19875 107 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 DAP3P51398 398 aaKnown RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 LOXL3P58215 753 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 TSPAN5P62079 268 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 FMODQ06828 376 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR7A5Q15622 319 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 C1orf100Q5SVJ3 147 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 GLYATL3Q5SZD4 288 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM71Q6P5X7 295 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 DCXRQ7Z4W1 244 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR51S1Q8NGJ8 323 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 PCNPQ8WW12 178 aaKnown RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 PNPLA2Q96AD5 504 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 SEH1LQ96EE3 360 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CCDC120Q96HB5 630 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 WDR77Q9BQA1 342 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 ALX4Q9H161 411 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 ATG5Q9H1Y0 275 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CDCP1Q9H5V8 836 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 KLHL13Q9P2N7 655 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CKLFQ9UBR5 152 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 HHLA2Q9UM44 414 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR6C65A6NJZ3 312 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 VWC2LB2RUY7 222 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 EFNA2O43921 213 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CD3DP04234 171 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 GTF2F2P13984 249 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 NAGAP17050 411 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 ACHEP22303 614 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 H2BFSP57053 126 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 RAC3P60763 192 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 C2orf68Q2NKX9 166 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 SLC25A53Q5H9E4 307 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 DNM1P34Q6PK57 102 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms