RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 FBXW12Q6X9E4 464 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ELMOD2Q8IZ81 293 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 SPARTQ8N0X7 666 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 RNF166Q96A37 237 aaPredicted RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 CMBLQ96DG6 245 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 MRPL37Q9BZE1 423 aaKnown RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 ZNF696Q9H7X3 374 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 GPR84Q9NQS5 396 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 FRRS1LQ9P0K9 344 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 LSM2Q9Y333 95 aaKnown RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 PNMA8CA0A1B0GUJ8 204 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 A0A1W2PPW3 197 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 P2RY10O00398 339 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 TIMM8AO60220 97 aaPredicted RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 CLPTM1O96005 669 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 LALBAP00709 142 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 CCR9P51686 369 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 CDK5R1Q15078 307 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 LRP11Q86VZ4 500 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ZNF611Q8N823 705 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 SPSB4Q96A44 273 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 COMMD4Q9H0A8 199 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 CSMD2Q7Z408 3487 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 GGT3PA6NGU5 568 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 PSG7Q13046 419 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 OR5AK2Q8NH90 309 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 FAM71F1Q96KD3 344 aaPredicted RBP13.07□□□□□ -0.32
TPM1-206ENST00000358278 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
TPM1-206ENST00000358278 ST6GALNAC2Q9UJ37 374 aa13.07□□□□□ -0.32
TPM1-206ENST00000358278 IGLV3-9A0A075B6K5 115 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 A0A087WXM4 84 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 hCG_38984A0A1B0GV85 526 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 LOC107986453A0A1B0GWG9 222 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 OR4C45A6NMZ5 311 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 B9A039 149 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 H3BSH0 61 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 PRF1P14222 555 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 SELEP16581 610 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
TPM1-206ENST00000358278 FAM3AP98173 230 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 BDH1Q02338 343 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 NKPD1Q17RQ9 610 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 TMEM244Q5VVB8 128 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 OR2T2Q6IF00 324 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 HAVCR1Q96D42 359 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 VCX3AQ9NNX9 186 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 MYEF2Q9P2K5 600 aaKnown RBP13.06□□□□□ -0.32
TPM1-206ENST00000358278 PURGQ9UJV8 347 aaKnown RBP13.06□□□□□ -0.32
TPM1-206ENST00000358278 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 ARID1AO14497 2285 aa13.06□□□□□ -0.32
TPM1-206ENST00000358278 PLSCR5A0PG75 271 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 SYT7O43581 403 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 MTRF1O75570 445 aaKnown RBP13.05□□□□□ -0.32
TPM1-206ENST00000358278 ZFPL1O95159 310 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 ATP6V1B1P15313 513 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 CELP19835 753 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 EVX1P49640 407 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 GSK3AP49840 483 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 ACSM1Q08AH1 577 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 DOC2BQ14184 412 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 EFNB3Q15768 340 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 MOGQ16653 247 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 OR56B2PQ8NGI1 322 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 FCGR1BQ92637 280 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 CBLN4Q9NTU7 201 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 TAAR3PQ9P1P4 343 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 LAMP3Q9UQV4 416 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
TPM1-206ENST00000358278 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 M0R233 179 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 OGG1O15527 345 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 DHRS3O75911 302 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 IGLV3-1P01715 115 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 SOD3P08294 240 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 DANCRP0C864 163 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 KITLGP21583 273 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 PCMT1P22061 227 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 NEDD8Q15843 81 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms