RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF732B4DXR9 585 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 DEGS1O15121 323 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 SLC22A1O15245 554 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 XPNPEP2O43895 674 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 TMEM127O75204 238 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 PEX14O75381 377 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ZNF474Q6S9Z5 364 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 GLCCI1Q86VQ1 547 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 RELL2Q8NC24 303 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 CCL17Q92583 94 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 BORCS5Q969J3 196 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 C14orf79Q96F83 325 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 SIGLEC11Q96RL6 698 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 MGLLQ99685 303 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 RHOFQ9HBH0 211 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CHST2Q9Y4C5 530 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 IFNA6P05013 189 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CCL2P13500 99 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ZNF44P15621 663 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 RPS2P15880 293 aaKnown RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 TGFBR2P37173 567 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 TMEM185AQ8NFB2 350 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 PERPQ96FX8 193 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 BCL7BQ9BQE9 202 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 C6orf62Q9GZU0 229 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 ACOXLQ9NUZ1 547 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 NUFIP1Q9UHK0 495 aaKnown RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 CYB5R1Q9UHQ9 305 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 IGHV1-18A0A0C4DH31 117 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 A0A0U1RQV5 110 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 H3BSH0 61 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 DLGAP1O14490 977 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 PRF1P14222 555 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 RAB3BP20337 219 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CA6P23280 308 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CCDC92Q53HC0 331 aaPredicted RBP7.99□□□□□ -1.13
UPF2-202ENST00000357604 LIPNQ5VXI9 398 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 GABRG1Q8N1C3 465 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 BARHL1Q9BZE3 327 aa7.99□□□□□ -1.13
UPF2-202ENST00000357604 CD300LBA8K4G0 201 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 MCRIP1C9JLW8 97 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 KLF4O43474 513 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 SULT1B1O43704 296 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 NDUFB7P17568 137 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 GABRA5P31644 462 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 ALDH3B1P43353 468 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 EFNA4P52798 201 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 LINC00596Q86U02 117 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 OR8D4Q8NGM9 314 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 OR51F2Q8NH61 342 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 KCNG3Q8TAE7 436 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 LRRC29Q8WV35 223 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 TPK1Q9H3S4 243 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 KCNS2Q9ULS6 477 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 RP1P56715 2156 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 THBDP07204 575 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PATE4P0C8F1 98 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PRKACAP17612 351 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 IKZF1Q13422 519 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 ACSM3Q53FZ2 586 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 PLXDC2Q6UX71 529 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 FAM185AQ8N0U4 392 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 ZIC4Q8N9L1 334 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 RAB2BQ8WUD1 216 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 MRPS28Q9Y2Q9 187 aaKnown RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 ADAMTS20P59510 1910 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PPIAL4EA0A075B759 164 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PPIAL4DF5H284 164 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 DBHP09172 617 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PPIAL4FP0DN26 164 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 SLC2A1P11166 492 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 DOC2BQ14184 412 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 MBNL2Q5VZF2 373 aaKnown RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 NOX3Q9HBY0 568 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 UFSP2Q9NUQ7 469 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 IL19Q9UHD0 177 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PLEKHA6Q9Y2H5 1048 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PPIAL4AQ9Y536 164 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 IGHV1-69-2A0A0G2JMI3 117 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 CCDC182A6NF36 153 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 HMGB3O15347 200 aaKnown RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 FOXH1O75593 365 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 PAHP00439 452 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 APOA1P02647 267 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 CHRM2P08172 466 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 MDH2P40926 338 aaKnown RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 GZMKP49863 264 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 SNU13P55769 128 aaKnown RBP7.98□□□□□ -1.13
UPF2-202ENST00000357604 GLYATL3Q5SZD4 288 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 C6orf183Q5T699 404 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 FAM122BQ7Z309 247 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 NANOGP1Q8N7R0 232 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 OR56B1Q8NGI3 324 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 TMEM138Q9NPI0 162 aa7.98□□□□□ -1.13
UPF2-202ENST00000357604 SPINT2O43291 252 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 HSPA12AO43301 675 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 TOXO94900 526 aa7.97□□□□□ -1.13
UPF2-202ENST00000357604 THY1P04216 161 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms