RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SLCO1C1Q9NYB5 712 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 DNAJC13O75165 2243 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 A0A1W2PNR3 127 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NPIPB8E9PQR5 432 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 CRYAAP02489 173 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 CD3DP04234 171 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 RAE1P78406 368 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ZDHHC22Q8N966 263 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 MITD1Q8WV92 249 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 REEP6Q96HR9 211 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 S1PR3Q99500 378 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 MMP25Q9NPA2 562 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 EXOGQ9Y2C4 368 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 PRRG2O14669 202 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 PRKNO60260 465 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 IL2RAP01589 272 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 CCL11P51671 97 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 AGERQ15109 404 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ADIRFQ15847 76 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 TMEM128Q5BJH2 165 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ANKRD16Q6P6B7 361 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 SUMF1Q8NBK3 374 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR2V1Q8NHB1 315 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF75AQ96N20 296 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 FOXQ1Q9C009 403 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 MBD1Q9UIS9 605 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 FER1L6Q2WGJ9 1857 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 NRG2O14511 850 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 CXCL13O43927 109 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 HEXAP06865 529 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR51H1Q8NH63 302 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 IER2Q9BTL4 223 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 WSB2Q9NYS7 404 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 AK3Q9UIJ7 227 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 H7BYZ3 331 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 CCSO14618 274 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR10A3P58181 314 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 Q6ZS52 159 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 Q8IYB0 196 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR10P1Q8NGE3 313 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR10Z1Q8NGY1 313 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 HPSE2Q8WWQ2 592 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 C12orf49Q9H741 205 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 MED29Q9NX70 200 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 PROCRQ9UNN8 238 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 SLC22A13Q9Y226 551 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 OR2J2O76002 312 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 PRSS23O95084 383 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 GP1BAP07359 652 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ATF1P18846 271 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 DMWDQ09019 674 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 HABP2Q14520 560 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 TESK1Q15569 626 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF718Q3SXZ3 478 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 FAM162BQ5T6X4 162 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 CORO6Q6QEF8 472 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 CDC20BQ86Y33 519 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 SIRT6Q8N6T7 355 aa10.6□□□□□ -0.71
COL9A1-202ENST00000357250 APOBEC3DQ96AK3 386 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 ISG20L2Q9H9L3 353 aaKnown RBP10.6□□□□□ -0.71
COL9A1-202ENST00000357250 TRPM6Q9BX84 2022 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF724A8MTY0 619 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 SCGB1D1O95968 90 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 CISD3P0C7P0 127 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 GFERP55789 205 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 FUT7Q11130 342 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 EIF3IQ13347 325 aaKnown RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 OSR2Q8N2R0 312 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 KDF1Q8NAX2 398 aaPredicted RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 OR4C16Q8NGL9 310 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 PLA2G2FQ9BZM2 168 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 NCOR1O75376 2440 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 UMAD1C9J7I0 102 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 PCBP3P57721 371 aaKnown RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 FOXF1Q12946 379 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 ENDOGQ14249 297 aaKnown RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 GPNMBQ14956 572 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 RTL8BQ17RB0 113 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 ACOT6Q3I5F7 207 aaPredicted RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 TOR2AQ5JU69 321 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 XAF1Q6GPH4 301 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 BAGE3Q86Y29 109 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 BAGE2Q86Y30 109 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 H1FXQ92522 213 aaKnown RBP10.59□□□□□ -0.71
COL9A1-202ENST00000357250 MRGPRX3Q96LB0 322 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 C10orf90Q96M02 699 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 HIF1ANQ9NWT6 349 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 SH3BGRL2Q9UJC5 107 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms