RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZDHHC22Q8N966 263 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 FAM71F1Q96KD3 344 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-203ENST00000356147 S1PR5Q9H228 398 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 CHRDQ9H2X0 955 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 TXNIPQ9H3M7 391 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 PDE7BQ9NP56 450 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 PRODH2Q9UF12 536 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 VDAC3Q9Y277 283 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 RHBDD3Q9Y3P4 386 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 CELSR3Q9NYQ7 3312 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 IGHV3-20A0A0C4DH32 117 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 LINC01565O15544 149 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF44P15621 663 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
PTPRA-203ENST00000356147 FABP9Q0Z7S8 132 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 PRTGQ2VWP7 1150 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 C1orf140Q5VVS0 124 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 TGM7Q96PF1 710 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 SEC61A2Q9H9S3 476 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 TAF9BQ9HBM6 251 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 GSN-AS1Q9NRJ2 163 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 PQLC2LA1A4F0 135 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 MEGF11A6BM72 1044 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 DBX1A6NMT0 343 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 M0R036 132 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 NME2P1O60361 137 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 C1QL1O75973 258 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 TTRP02766 147 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 HLA-GP17693 338 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 RAB6AP20340 208 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF93P35789 620 aaPredicted RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 SGCBQ16585 318 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 EIF2S3LQ2VIR3 472 aaKnown RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 C1orf100Q5SVJ3 147 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 C10orf91Q5T1B1 145 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 Q6ZRG5 221 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 TERB2Q8NHR7 220 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 ST7LQ8TDW4 575 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 ARHGAP5-AS1Q96IT6 56 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 SLC2A8Q9NY64 477 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 UNC13CQ8NB66 2214 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 A0A1W2PPH5 198 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 PLPP3O14495 311 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 SRSF10O75494 262 aaKnown RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 TNFP01375 233 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 NQO2P16083 231 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 CDAP32320 146 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 DHPSP49366 369 aaPredicted RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 CAV2P51636 162 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 RAB5BP61020 215 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 POLR2GP62487 172 aaKnown RBP eCLIP9□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM240Q5SV17 173 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 ADAM5Q6NVV9 412 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 HOGA1Q86XE5 327 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 MISPQ8IVT2 679 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 BSCL2Q96G97 398 aaPredicted RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 GPER1Q99527 375 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 DZANK1Q9NVP4 752 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 GHRLQ9UBU3 117 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 FLVCR1Q9Y5Y0 555 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 CRTAPO75718 401 aaPredicted RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 FSTP19883 344 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 CFPP27918 469 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF616Q08AN1 781 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 PLCXD2Q0VAA5 305 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM128Q5BJH2 165 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 CARD17Q5XLA6 110 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 LYPD6Q86Y78 171 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 SLC25A43Q8WUT9 341 aaPredicted RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 RAB3CQ96E17 227 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 BCL2L14Q9BZR8 327 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 LPAR5Q9H1C0 372 aa9□□□□□ -0.97
PTPRA-203ENST00000356147 LSM5Q9Y4Y9 91 aaKnown RBP9□□□□□ -0.97
PTPRA-203ENST00000356147 VPS13AQ96RL7 3174 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 IGHV5-51A0A0C4DH38 117 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C5orf63A6NC05 138 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 AHSA1O95433 338 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 S100A9P06702 114 aaKnown RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF14P17017 642 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 AMY2BP19961 511 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 VEGFBP49765 207 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ASCL1P50553 236 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM50BP56557 158 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C1orf189Q5VU69 101 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF704Q6ZNC4 412 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ADAMTS17Q8TE56 1095 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ADAMTS18Q8TE60 1221 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 HIST1H2BAQ96A08 127 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C5orf34Q96MH7 638 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 SLC5A7Q9GZV3 580 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF304Q9HCX3 659 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 MIOXQ9UGB7 285 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 POLR1DQ9Y2S0 133 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 CABIN1Q9Y6J0 2220 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NPIPA5E9PKD4 350 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 HCKP08631 526 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms