RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF439Q8NDP4 499 aa12.68□□□□□ -0.38
SREBF1-202ENST00000355815 PIGTQ969N2 578 aa12.68□□□□□ -0.38
SREBF1-202ENST00000355815 CPNE4Q96A23 557 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-202ENST00000355815 SUSD2Q9UGT4 822 aa12.68□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF84P51523 738 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 CD226Q15762 336 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TOMM34Q15785 309 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 ACKR1Q16570 336 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 RPUSD3Q6P087 351 aaKnown RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 FIP1L1Q6UN15 594 aaKnown RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 GLIPR1L1Q6UWM5 242 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TAAR8Q969N4 342 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 CMBLQ96DG6 245 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 MAGT1Q9H0U3 335 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 ADGRL4Q9HBW9 690 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 GHRLQ9UBU3 117 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 MDC1Q14676 2089 aaKnown RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 A0A1W2PPC4 97 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TUBAL3A6NHL2 446 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 AKR7A3O95154 331 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 HTD2P86397 168 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 DHRS2Q13268 280 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 BAGE3Q86Y29 109 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 BAGE2Q86Y30 109 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 CCDC71LQ8N9Z2 235 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 KIRREL1Q96J84 757 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 DNAJB12Q9NXW2 375 aaKnown RBP12.67□□□□□ -0.38
SREBF1-202ENST00000355815 RARRES3Q9UL19 164 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 NLRC5Q86WI3 1866 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 TTC28Q96AY4 2481 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 H0Y8G0 127 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 MISPQ8IVT2 679 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 CABLES2Q9BTV7 478 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 FKRPQ9H9S5 495 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 KLHL13Q9P2N7 655 aa12.67□□□□□ -0.38
SREBF1-202ENST00000355815 A0A1W2PPQ1 181 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SULT1A3P0DMM9 295 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SULT1A4P0DMN0 295 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 FCGR2AP12318 317 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 B2MP61769 119 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 Q3ZCU0 254 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 GIMAP5Q96F15 307 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF251Q9BRH9 671 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 JAM3Q9BX67 310 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 ACAD8Q9UKU7 415 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 POLEQ07864 2286 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 A0A1W2PNR3 127 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CYR61O00622 381 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 THY1P04216 161 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 HPNP05981 417 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 PTGFRP43088 359 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 DOC2BQ14184 412 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF74Q16587 644 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CD300LDQ6UXZ3 194 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 TMPRSS11FQ6ZWK6 438 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 HSD17B13Q7Z5P4 300 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 STPG2Q8N412 459 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 NT5CQ8TCD5 201 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 TTC9Q92623 222 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 H3BP45 60 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 NKX2-2O95096 273 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CD53P19397 219 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CXCL2P19875 107 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CARD18P57730 90 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 TMEM37Q8WXS4 190 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SDHCQ99643 169 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-202ENST00000355815 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 CTSFQ9UBX1 484 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SLCO1B1Q9Y6L6 691 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 ABCA1O95477 2261 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 DSPPQ9NZW4 1301 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 SCN8AQ9UQD0 1980 aa12.66□□□□□ -0.38
SREBF1-202ENST00000355815 TLCD2A6NGC4 264 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 IGKV1D-16P01601 117 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 HSD17B7P56937 341 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 MIDNQ504T8 468 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 LPCAT3Q6P1A2 487 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 DCXRQ7Z4W1 244 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OR1J1Q8NGS3 322 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 NINJ1Q92982 152 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 PLK3Q9H4B4 646 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms