RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TXNIPQ9H3M7 391 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 K7ESM1 405 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 CDC20Q12834 499 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 CLN3Q13286 438 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 OR1N1Q8NGS0 311 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 EDARADDQ8WWZ3 215 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 OR8B4Q96RC9 309 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 AUNIPQ9H7T9 357 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 NALCNQ8IZF0 1738 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 ZNF195O14628 629 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 KLKB1P03952 638 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 MEOX1P50221 254 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 ADPRHP54922 357 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 OR4S1Q8NGB4 309 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 OR52N5Q8NH56 324 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 MENTQ9BUN1 341 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 CHST6Q9GZX3 395 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 TBC1D29Q9UFV1 150 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 TRAPPC1Q9Y5R8 145 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 LRRC37A3O60309 1634 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 SARAFQ96BY9 339 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 SMIM12Q96EX1 92 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 RNF24Q9Y225 148 aa13.48□□□□□ -0.25
LMX1B-201ENST00000355497 GPR31O00270 319 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 DUSP2Q05923 314 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 PNLIPRP3Q17RR3 467 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-201ENST00000355497 MED18Q9BUE0 208 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ST3GAL6Q9Y274 331 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ARRDC5A6NEK1 342 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ZNF785A8K8V0 405 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 IDSB3KWA1 339 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 PMCHP20382 165 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 NUDT8Q8WV74 236 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 HGDQ93099 445 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 POM121L2Q96KW2 1035 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 WDR61Q9GZS3 305 aaKnown RBP13.47□□□□□ -0.25
LMX1B-201ENST00000355497 HPP00738 406 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ARRB2P32121 409 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 FZD2Q14332 565 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ELFN2Q5R3F8 820 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 GALNT16Q8N428 558 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 TMEM229BQ8NBD8 167 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 IP6K3Q96PC2 410 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 SIGLEC11Q96RL6 698 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ZPBPQ9BS86 351 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 FGF22Q9HCT0 170 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 H0YIG0 161 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 HRO43593 1189 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 CTSLP07711 333 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 SFTA3P0C7M3 94 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 NXPE3Q969Y0 559 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 GALMQ96C23 342 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 PELI1Q96FA3 418 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 SLC22A13Q9Y226 551 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 LRP6O75581 1613 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 IGHV3-15A0A0B4J1V0 119 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 HSBP1O75506 76 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 S100A4P26447 101 aaKnown RBP13.47□□□□□ -0.25
LMX1B-201ENST00000355497 EMDP50402 254 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 GPNMBQ14956 572 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 C17orf78Q8N4C9 275 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 BAHD1Q8TBE0 780 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-201ENST00000355497 MRGPRX4Q96LA9 322 aa13.47□□□□□ -0.25
LMX1B-201ENST00000355497 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 PPP1R1CQ8WVI7 109 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 ACY3Q96HD9 319 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 RHOFQ9HBH0 211 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 CCDC187A0A096LP49 1063 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 GFYI3L273 518 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 PHOX2AO14813 284 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 CLDN15P56746 228 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 SLC25A26Q70HW3 274 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 GLCCI1Q86VQ1 547 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 YIPF6Q96EC8 236 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-201ENST00000355497 ZBTB25P24278 435 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 ZNF429Q86V71 674 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 OR2M3Q8NG83 312 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 OR52B4Q8NGK2 314 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 TECTBQ96PL2 329 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 C6orf106Q9H6K1 298 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-201ENST00000355497 MED29Q9NX70 200 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 SLCO1C1Q9NYB5 712 aa13.46□□□□□ -0.25
LMX1B-201ENST00000355497 ATF1P18846 271 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 ZNF680Q8NEM1 530 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 BLNKQ8WV28 456 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 IER2Q9BTL4 223 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 TOLLIPQ9H0E2 274 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 AAMDCQ9H7C9 122 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 P4HTMQ9NXG6 502 aa13.46□□□□□ -0.26
LMX1B-201ENST00000355497 WSB2Q9NYS7 404 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms