RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PIGCQ92535 297 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 MTFP1Q9UDX5 166 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 TRAPPC2LH3BP13 241 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 PDZK1IP1Q13113 114 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 KLF9Q13886 244 aaPredicted RBP11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OTOSQ8NHW6 89 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 FAM213BQ8TBF2 198 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 TAAR8Q969N4 342 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 MMP25Q9NPA2 562 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 TRPM7Q96QT4 1865 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 RPS10-NUDT3A0A1W2PQS6 291 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CTDSPLO15194 276 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CTAG2O75638 210 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 AGFG2O95081 481 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 GP1BAP07359 652 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CHRM2P08172 466 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CNR1P21554 472 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OMGP23515 440 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 RPS10P46783 165 aaKnown RBP11.07□□□□□ -0.64
COLCA1-201ENST00000355430 SLC25A1P53007 311 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 ISXQ2M1V0 245 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 PRR18Q8N4B5 295 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OR10Z1Q8NGY1 313 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 SCMH1Q96GD3 660 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 GPR137Q96N19 417 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 ABHD6Q9BV23 337 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 MED29Q9NX70 200 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 FUT5Q11128 374 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 FBXW12Q6X9E4 464 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 HES7Q9BYE0 225 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF286AQ9HBT8 521 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 LINC00862A6NCI5 91 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 HPP00738 406 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 MEOX1P50221 254 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 EFNA3P52797 238 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CLDN15P56746 228 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 NKX6-1P78426 367 aaPredicted RBP11.07□□□□□ -0.64
COLCA1-201ENST00000355430 BAMBIQ13145 260 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF425Q6IV72 752 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CMTM1Q8IZ96 169 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 DOCK3Q8IZD9 2030 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 OR5B12Q96R08 314 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 C20orf24Q9BUV8 137 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF768Q9H5H4 540 aaKnown RBP11.07□□□□□ -0.64
COLCA1-201ENST00000355430 UCK1Q9HA47 277 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 CHST11Q9NPF2 352 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 HAO2Q9NYQ3 351 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 B3GAT1Q9P2W7 334 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 PATJQ8NI35 1801 aa11.07□□□□□ -0.64
COLCA1-201ENST00000355430 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 IMPA2O14732 288 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF728P0DKX0 622 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 OGFOD3Q6PK18 319 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 C14orf79Q96F83 325 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 WWTR1Q9GZV5 400 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 MCRIP1C9JLW8 97 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 SSBP1Q04837 148 aaKnown RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RSPO4Q2I0M5 234 aaPredicted RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 OR52W1Q6IF63 320 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RRNAD1Q96FB5 475 aaKnown RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 MRGPRX4Q96LA9 322 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 TSPAN32Q96QS1 320 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 LRP12Q9Y561 859 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 CYB5BO43169 146 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 CBX7O95931 251 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RFC3P40938 356 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 LGALS4P56470 323 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RBM39Q14498 530 aaKnown RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF684Q5T5D7 378 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RHBDD2Q6NTF9 364 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 C11orf87Q6NUJ2 197 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 ZAR1Q86SH2 424 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 SMCO4Q9NRQ5 59 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RLFQ13129 1914 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 CELA2BP08218 269 aaPredicted RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RRASP10301 218 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 CBR1P16152 277 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 CPT2P23786 658 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 OR8B8Q15620 311 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 GPR119Q8TDV5 335 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 C1QTNF6Q9BXI9 259 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 PIGLQ9Y2B2 252 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 SUMO3P55854 103 aaPredicted RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 DSCR4P56555 118 aaPredicted RBP11.06□□□□□ -0.64
COLCA1-201ENST00000355430 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 RFLNBQ8N5W9 214 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 BPIFCQ8NFQ6 507 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 PBOV1Q9GZY1 135 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 PILRBQ9UKJ0 227 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 TCFL5Q9UL49 500 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF638Q14966 1978 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms