RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 BSGP35613 385 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF154Q13106 437 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 GPR87Q9BY21 358 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 TXNIPQ9H3M7 391 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PRSS23O95084 383 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 AKR7A3O95154 331 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 DUS4LO95620 317 aaKnown RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PTHLHP12272 177 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF17P17021 662 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 CSN1S1P47710 185 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ARG2P78540 354 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 RNF165Q6ZSG1 346 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 WSB2Q9NYS7 404 aaPredicted RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 TMEM202A6NGA9 273 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ICAM2P13598 275 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ERVFC1-1P60608 527 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PPP1R1AQ13522 171 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ORAI1Q96D31 301 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 IL23AQ9NPF7 189 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 VAMP5O95183 116 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 SELENOPP49908 381 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 SSR4P51571 173 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 BCORP1Q8N888 145 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF775Q96BV0 537 aaPredicted RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 PACRGQ96M98 296 aaPredicted RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 A0A1B0GTL3 188 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 HS3ST1O14792 307 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 RPLP1P05386 114 aaKnown RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 GP1BAP07359 652 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 HMGA2P52926 109 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 INPP5JQ15735 1006 aaPredicted RBP11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 RTL8AQ9BWD3 113 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
SYNCRIP-201ENST00000355238 TCRBV16S1A1N1A0A5B0 115 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 ENSAO43768 121 aaKnown RBP11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR7C2O60412 319 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 ADH4P08319 380 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CHRNB4P30926 498 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CD300LDQ6UXZ3 194 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 SLC17A4Q9Y2C5 497 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 MORN1Q5T089 497 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR5M9Q8NGP3 310 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 GPR137Q96N19 417 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 WDR1O75083 606 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 BPIFB3P59826 476 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 PMP22Q01453 160 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 LAIR1Q6GTX8 287 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 DRAM2Q6UX65 266 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 SIRT3Q9NTG7 399 aaPredicted RBP11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CHD4Q14839 1912 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 AQP7P3A6NL99 342 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 DBX1A6NMT0 343 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 B4DEV8 164 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CIDEAO60543 219 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 IGHA2P01877 340 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 HTRA3P83110 453 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 NR0B2Q15466 257 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF383Q8NA42 475 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR52N4Q8NGI2 321 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 TPSD1Q9BZJ3 242 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 POLDIP2Q9Y2S7 368 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 TRBV5-4A0A0C4DH59 114 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 CRYBA1P05813 215 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 LGALSLQ3ZCW2 172 aaPredicted RBP11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 Q7L0L9 218 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 Q9N2K0 584 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR5V1Q9UGF6 321 aa11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 ELF5Q9UKW6 265 aaPredicted RBP11.5□□□□□ -0.57
SYNCRIP-201ENST00000355238 M0R135 149 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 TNFRSF4P43489 277 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 IL13RA2Q14627 380 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 PRAMEF20Q5VT98 475 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 FBXL6Q8N531 539 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
SYNCRIP-201ENST00000355238 A0A1W2PR64 198 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms