RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 KLHL9Q9P2J3 617 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 GOLT1BQ9Y3E0 138 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 MRPS18BQ9Y676 258 aaKnown RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 C13orf42A0A1B0GVH6 325 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 OR5H14A6NHG9 310 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF264O43296 627 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 EIF4E2O60573 245 aaKnown RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 ADAP00813 363 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 FUT1P19526 365 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 RAB5CP51148 216 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 MMP15P51511 669 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 FBXW4P57775 412 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 MLF1P58340 268 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 CLEC2AQ6UVW9 174 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 THNSL2Q86YJ6 484 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 GRHL3Q8TE85 626 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 SULT4A1Q9BR01 284 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 SLC7A7Q9UM01 511 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 HMSDA8MTL9 139 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 DCTN6O00399 190 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 PRODHO43272 600 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 FBXO24O75426 580 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ITGA10O75578 1167 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 AQP8O94778 261 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 SERPINA7P05543 415 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 AGAP20933 346 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 DHODHQ02127 395 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF674Q2M3X9 581 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 PCGF3Q3KNV8 242 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 CD200R1LQ6Q8B3 271 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 WDR88Q6ZMY6 472 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 KCTD9Q7L273 389 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 MARCH3Q86UD3 253 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 CPOQ8IVL8 374 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 DND1Q8IYX4 353 aaKnown RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 SPICQ8N5J4 248 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 JAGN1Q8N5M9 183 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 FAM98AQ8NCA5 519 aaKnown RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 OR51L1Q8NGJ5 315 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 CASTOR1Q8WTX7 329 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 FAM46AQ96IP4 442 aaKnown RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM27Q9HBJ8 222 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 SH2D2AQ9NP31 389 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 DOK5Q9P104 306 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ICAM5Q9UMF0 924 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM129A0AVI4 362 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 C7orf77A4D0Y5 90 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF727A8MUV8 499 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 HIST1H1BP16401 226 aaKnown RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 PTGDSP41222 190 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 GPR4P46093 362 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 MTNR1BP49286 362 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OR12D2P58182 307 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 PITPNAQ00169 270 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF117Q03924 483 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 AIMP2Q13155 320 aaKnown RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 RSPO4Q2I0M5 234 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF322Q6U7Q0 402 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 CBLN3Q6UW01 205 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 MBOAT2Q6ZWT7 520 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OR6V1Q8N148 313 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 PRSS35Q8N3Z0 413 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 TEX19Q8NA77 164 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OR1J4Q8NGS1 313 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OR5W2Q8NH69 310 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 ABHD4Q8TB40 342 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 FCAMRQ8WWV6 532 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 SPACA9Q96E40 222 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 PTGES2Q9H7Z7 377 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 A0A1B0GWA3 101 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 KLF4O43474 513 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OMPP47874 163 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 GSK3AP49840 483 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 DHRS11Q6UWP2 260 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 CXXC5Q7LFL8 322 aaKnown RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 CPEB3Q8NE35 698 aaKnown RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 OR14K1Q8NGZ2 314 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 SMIM4Q8WVI0 70 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 CCNL2Q96S94 520 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 TBL1XR1Q9BZK7 514 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 CBLN4Q9NTU7 201 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 COMMD9Q9P000 198 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 RCC2Q9P258 522 aaKnown RBP8.99□□□□□ -0.97
SYNE1-203ENST00000354674 AMDHD2Q9Y303 409 aa8.99□□□□□ -0.97
SYNE1-203ENST00000354674 IGLV3-32A0A0A0MS00 114 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 DAPL1A0PJW8 107 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 MASP2O00187 686 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 TCF21O43680 179 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PRAF2O60831 178 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PGAM2P15259 253 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RCC1P18754 421 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 SLC6A8P48029 635 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PRKXP51817 358 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RAB40BQ12829 278 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM69Q5SWH9 247 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ULK3Q6PHR2 472 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RPS19BP1Q86WX3 136 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms