RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 TGFBR2P37173 567 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 CRYBB2P43320 205 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 GIPRP48546 466 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 ISL1P61371 349 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 RRAS2P62070 204 aaPredicted RBP9.5□□□□□ -0.89
RTN3-204ENST00000354497 SLC35A2P78381 396 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 HSF2Q03933 536 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SLC9A3R2Q15599 337 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SYPL1Q16563 259 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 OCLNQ16625 522 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 HFEQ30201 348 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 PCGF3Q3KNV8 242 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 TMEM236Q5W0B7 351 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SAXO2Q658L1 398 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 C10orf107Q8IVU9 208 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 OFCC1Q8IZS5 231 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 KIR3DL3Q8N743 410 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 ZNF555Q8NEP9 628 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 TINAGL1Q9GZM7 467 aaPredicted RBP9.5□□□□□ -0.89
RTN3-204ENST00000354497 TNFRSF19Q9NS68 423 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 PLEK2Q9NYT0 353 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 COPZ2Q9P299 210 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SEC14L4Q9UDX3 406 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 PRAMEF27A3QJZ7 478 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 FAAHO00519 579 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 PHYHO14832 338 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 LCKP06239 509 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 CHRNGP07510 517 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 GUSBP08236 651 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 ACSM4P0C7M7 580 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 G6PDP11413 515 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 IFI30P13284 250 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 UQCRC2P22695 453 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 KLF3P57682 345 aaPredicted RBP9.49□□□□□ -0.89
RTN3-204ENST00000354497 TAS2R60P59551 318 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 RAB1AP62820 205 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 UGT3A2Q3SY77 523 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 C6orf136Q5SQH8 315 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 PHYHD1Q5SRE7 291 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 WBP2NLQ6ICG8 309 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 RNF130Q86XS8 419 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 KRT73Q86Y46 540 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 RIMKLAQ8IXN7 391 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 OR8H3Q8N146 312 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 CCL17Q92583 94 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 OR2M2Q96R28 347 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 MRI1Q9BV20 369 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 GATA5Q9BWX5 397 aaPredicted RBP9.49□□□□□ -0.89
RTN3-204ENST00000354497 FN3KQ9H479 309 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 SAP30LQ9HAJ7 183 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 SEBOXQ9HB31 216 aaPredicted RBP9.49□□□□□ -0.89
RTN3-204ENST00000354497 RLIMQ9NVW2 624 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 FAM118AQ9NWS6 357 aa9.49□□□□□ -0.89
RTN3-204ENST00000354497 TESQ9UGI8 421 aaKnown RBP9.49□□□□□ -0.89
RTN3-204ENST00000354497 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
RTN3-204ENST00000354497 MYL12BO14950 172 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 NUPL2O15504 423 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 AKR7A2O43488 359 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 FOXH1O75593 365 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 DBIP07108 87 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 MYL12AP19105 171 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 NOS3P29474 1203 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 RPL14P50914 215 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 TIGD6Q17RP2 521 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 TIMM50Q3ZCQ8 353 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 CDNFQ49AH0 187 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 ZNF691Q5VV52 312 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 COMTD1Q86VU5 262 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SYT14Q8NB59 555 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 DEFB108BQ8NET1 73 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SYNPRQ8TBG9 265 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 C3orf30Q96M34 536 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 OXGR1Q96P68 337 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SLC35A5Q9BS91 424 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 DGCR6LQ9BY27 220 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 SLC38A1Q9H2H9 487 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 BEX1Q9HBH7 125 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 B3GAT2Q9NPZ5 323 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SCN3BQ9NY72 215 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 RDH8Q9NYR8 311 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 LEF1Q9UJU2 399 aaPredicted RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 DSPPQ9NZW4 1301 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 A0A1B0GVI7 797 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 TCRBV5S2A0A599 114 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 RAB19A4D1S5 217 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 A6NJY4 79 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 HMGN4O00479 90 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 RNASET2O00584 256 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 TIMM23O14925 209 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SGCEO43556 437 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 TRIM13O60858 407 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms