RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 TXN2Q99757 166 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 ADAT1Q9BUB4 502 aaKnown RBP13.89□□□□□ -0.19
PTPRO-202ENST00000348962 NXPH3O95157 252 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 FAHP16930 419 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 SNTB1Q13884 538 aaKnown RBP13.89□□□□□ -0.19
PTPRO-202ENST00000348962 PRICKLE4Q2TBC4 344 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 SOWAHCQ53LP3 525 aaPredicted RBP13.89□□□□□ -0.19
PTPRO-202ENST00000348962 PRSS45Q7RTY3 260 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 GON7Q9BXV9 100 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 RAB1BQ9H0U4 201 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 C20orf85Q9H1P6 137 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 COPS3Q9UNS2 423 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 MGMTP16455 207 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 SRP14P37108 136 aaKnown RBP13.89□□□□□ -0.19
PTPRO-202ENST00000348962 CCR6P51684 374 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 OR2B11Q5JQS5 317 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 FAM60AQ9NP50 221 aa13.89□□□□□ -0.19
PTPRO-202ENST00000348962 FAM221AA4D161 298 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 OR5H8P0DN80 308 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 PSMB3P49720 205 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 TESK1Q15569 626 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 PRSS42Q7Z5A4 293 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 RNF141Q8WVD5 230 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 CD3EP07766 207 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 CT45A10P0DMU9 189 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 CD1EP15812 388 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 ATF1P18846 271 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 OPCMLQ14982 345 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 TMPRSS11FQ6ZWK6 438 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 UBAC2Q8NBM4 344 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 FXYD1O00168 92 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 MAGEB4O15481 346 aaPredicted RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 PPT1P50897 306 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 MC2RQ01718 297 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 NUFIP2Q7Z417 695 aaKnown RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 OIT3Q8WWZ8 545 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 LOXL4Q96JB6 756 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 EXOSC3Q9NQT5 275 aaKnown RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 GNG13Q9P2W3 67 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 SH2D7A6NKC9 451 aaPredicted RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 NME2P22392 152 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 ACKR3P25106 362 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 YBX1P67809 324 aaKnown RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 FUT7Q11130 342 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 C2orf76Q3KRA6 126 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 ADGRG3Q86Y34 549 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 OTOSQ8NHW6 89 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 RAB1CQ92928 201 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 OR8B4Q96RC9 309 aa13.88□□□□□ -0.19
PTPRO-202ENST00000348962 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
PTPRO-202ENST00000348962 ZNF705FA8MVS1 300 aaPredicted RBP13.87□□□□□ -0.19
PTPRO-202ENST00000348962 PATE3B3GLJ2 98 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 ZNF705DP0CH99 300 aaPredicted RBP13.87□□□□□ -0.19
PTPRO-202ENST00000348962 ZNF705BP0CI00 300 aaPredicted RBP13.87□□□□□ -0.19
PTPRO-202ENST00000348962 FCGR2CP31995 323 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 OR52I2Q8NH67 350 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 TPPP3Q9BW30 176 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 TMEM30CPA0ZSE6 113 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 GLI4P10075 376 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 ZNF425Q6IV72 752 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 STAC2Q6ZMT1 411 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 GPATCH2Q9NW75 528 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 SOX18P35713 384 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 TAS2R45P59539 299 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 SPNS2Q8IVW8 549 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 DUS3LQ96G46 650 aaKnown RBP13.87□□□□□ -0.19
PTPRO-202ENST00000348962 GPM6AP51674 278 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 POU4F3Q15319 338 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 SOHLH1Q5JUK2 328 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 SLC35B4Q969S0 331 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 TMEM230Q96A57 120 aa13.87□□□□□ -0.19
PTPRO-202ENST00000348962 ZNF768Q9H5H4 540 aaKnown RBP13.87□□□□□ -0.19
PTPRO-202ENST00000348962 ICE1Q9Y2F5 2266 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 TMEM127O75204 238 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 HLA-HP01893 362 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 PPP1CAP62136 330 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 SSX2Q16385 188 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 POFUT1Q9H488 388 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 SDCBPO00560 298 aaPredicted RBP13.86□□□□□ -0.19
PTPRO-202ENST00000348962 KLF3P57682 345 aaPredicted RBP13.86□□□□□ -0.19
PTPRO-202ENST00000348962 RAC3P60763 192 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 UBE2G1P62253 170 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 OTPQ5XKR4 325 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 PMS2CLQ68D20 193 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 SPINK14Q6IE38 97 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 OR2T2Q6IF00 324 aa13.86□□□□□ -0.19
PTPRO-202ENST00000348962 SFTPA1Q8IWL2 248 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms