RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SUMF2Q8NBJ7 301 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 BSCL2Q96G97 398 aaPredicted RBP13.68□□□□□ -0.22
LMNA-201ENST00000347559 RARRES2Q99969 163 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 ABHD6Q9BV23 337 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 LOC101059948A0A1B0GTJ6 334 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 ZNF587BE7ETH6 402 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 PHOX2AO14813 284 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 LYL1P12980 280 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 PVRP15151 417 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 CCINQ13939 588 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 RD3Q7Z3Z2 195 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 DPPA2Q7Z7J5 298 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 HSD17B11Q8NBQ5 300 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 NTNG2Q96CW9 530 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 GNRHR2Q96P88 292 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 PTGES2Q9H7Z7 377 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 MEMO1Q9Y316 297 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 EDDM13A0A1B0GTR0 161 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BKO60814 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BJP06899 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 CXCL1P09341 107 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 ADH5P11766 374 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HPGDP15428 266 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 ZNF10P21506 573 aaPredicted RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BOP23527 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 G0S2P27469 103 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 CHATP28329 748 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 CRABP1P29762 137 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BBP33778 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 EMP2P54851 167 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BDP58876 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BCP62807 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST2H2BEQ16778 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 KCTD18Q6PI47 426 aaPredicted RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 CBLN3Q6UW01 205 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BHQ93079 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 OR2A5Q96R48 311 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BNQ99877 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 HIST1H2BMQ99879 126 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 ST6GALNAC5Q9BVH7 336 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 SRMSQ9H3Y6 488 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 LUZP4Q9P127 313 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 CYB5BO43169 146 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 FKTNO75072 461 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 MPZP25189 248 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 PPP1CCP36873 323 aaKnown RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 TAGLN2P37802 199 aaKnown RBP13.67□□□□□ -0.22
LMNA-201ENST00000347559 RAB1AP62820 205 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 METTL21AQ8WXB1 218 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 NELFAQ9H3P2 528 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 UBQLN4Q9NRR5 601 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 C19orf12Q9NSK7 152 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 CENPMQ9NSP4 180 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
LMNA-201ENST00000347559 TGIF2-C20orf24A0A0A6YYL0 155 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 TRGC2P03986 189 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 CEBPBP17676 345 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 OR3A2P47893 321 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 PLPP4Q5VZY2 271 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 PMM1Q92871 262 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 SH3BGRL3Q9H299 93 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 UNKLQ9H9P5 680 aaKnown RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 RCL1Q9Y2P8 373 aaKnown RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 EML2O95834 649 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 IGFALSP35858 605 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 EGR4Q05215 589 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 DMRTC1Q5HYR2 192 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 C1QL3Q5VWW1 255 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 OR2T2Q6IF00 324 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 MED25Q71SY5 747 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 CATSPERDQ86XM0 798 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 LINC00346Q8IVM7 164 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 APCDD1LQ8NCL9 501 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 OR5H2Q8NGV7 314 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 FAM213BQ8TBF2 198 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 Q8WTZ3 238 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 KLHDC3Q9BQ90 382 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 RTBDNQ9BSG5 229 aaPredicted RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 SCRT1Q9BWW7 348 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 OR11A1Q9GZK7 315 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 BANF2Q9H503 90 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 PHPT1Q9NRX4 125 aaPredicted RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 MRPL22Q9NWU5 206 aaKnown RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 TMEM184BQ9Y519 407 aaPredicted RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 MPIG6BO95866 241 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 ARFRP1Q13795 201 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 ZNF77Q15935 545 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 C1orf100Q5SVJ3 147 aa13.66□□□□□ -0.22
LMNA-201ENST00000347559 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
LMNA-201ENST00000347559 FDX2Q6P4F2 183 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms