RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 OR5D14Q8NGL3 314 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 OR5H6Q8NGV6 325 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 NANOS1Q8WY41 292 aaKnown RBP9.53□□□□□ -0.88
ECM1-201ENST00000346569 SPSB4Q96A44 273 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 SLC25A28Q96A46 364 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 FAM71F1Q96KD3 344 aaPredicted RBP9.53□□□□□ -0.88
ECM1-201ENST00000346569 CYSLTR2Q9NS75 346 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 ZNF391Q9UJN7 358 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 SPATA2Q9UM82 520 aa9.53□□□□□ -0.88
ECM1-201ENST00000346569 A6NIN4 97 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 ANXA2P2A6NMY6 339 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 DHRS7CA6NNS2 312 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 A8MXE2 369 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 MSTNO14793 375 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 TBX1O43435 398 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 RAD51DO75771 328 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 DHRS3O75911 302 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 ALX3O95076 343 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
ECM1-201ENST00000346569 CBR1P16152 277 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 RBPJQ06330 500 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 TSC22D1Q15714 1073 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 C1orf100Q5SVJ3 147 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 METAP1DQ6UB28 335 aaPredicted RBP9.52□□□□□ -0.89
ECM1-201ENST00000346569 CXorf67Q86X51 503 aaPredicted RBP9.52□□□□□ -0.89
ECM1-201ENST00000346569 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 CMTM3Q96MX0 182 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 SDHCQ99643 169 aaPredicted RBP9.52□□□□□ -0.89
ECM1-201ENST00000346569 MRI1Q9BV20 369 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 RGCCQ9H4X1 137 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 PPP1R3EQ9H7J1 279 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 CKLFQ9UBR5 152 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 ZNF629Q9UEG4 869 aaPredicted RBP9.52□□□□□ -0.89
ECM1-201ENST00000346569 TINAGQ9UJW2 476 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 RHBDD3Q9Y3P4 386 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 V9GYH0 126 aa9.52□□□□□ -0.89
ECM1-201ENST00000346569 A0A0B4J203 849 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 A0A0G2JNJ9 132 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 C5orf49A4QMS7 147 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 SLC17A2O00624 439 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 MTRF1O75570 445 aaKnown RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 ALDOBP05062 364 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 CALCBP10092 127 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 CCL2P13500 99 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 ELK1P19419 428 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 ACKR3P25106 362 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 OPRM1P35372 400 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 UBE2NP61088 152 aaKnown RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 FAM3AP98173 230 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 IFITM3Q01628 133 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 ZNF92Q03936 586 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 SPANXN2Q5MJ10 180 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 GLYATL3Q5SZD4 288 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 HES5Q5TA89 166 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 GLT8D1Q68CQ7 371 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 PGAP1Q75T13 922 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 UTS2BQ765I0 119 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 LRRC28Q86X40 367 aaPredicted RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 CDH26Q8IXH8 852 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 OR5AS1Q8N127 324 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 C17orf78Q8N4C9 275 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 ST6GALNAC3Q8NDV1 305 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 OR1M1Q8NGA1 313 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 OR2AE1Q8NHA4 323 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 TRMT10AQ8TBZ6 339 aaKnown RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 SSC4DQ8WTU2 575 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 ITFG2Q969R8 447 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 FOXRED1Q96CU9 486 aaPredicted RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 MS4A3Q96HJ5 214 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 REEP6Q96HR9 211 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 DIRAS2Q96HU8 199 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 CEP19Q96LK0 163 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 DMRTA2Q96SC8 542 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 REPIN1Q9BWE0 567 aaKnown RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 Q9UFV3 132 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 OR5V1Q9UGF6 321 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 STEAP1Q9UHE8 339 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 STARD10Q9Y365 291 aa9.51□□□□□ -0.89
ECM1-201ENST00000346569 HELZ2Q9BYK8 2649 aaKnown RBP9.51□□□□□ -0.89
ECM1-201ENST00000346569 IGKV1-9A0A0C4DH69 117 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 FABP12A6NFH5 140 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 OR5H1A6NKK0 313 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 ERVH48-1M5A8F1 160 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 XRCC2O43543 280 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 ICMTO60725 284 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 NGFP01138 241 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 IGKV3-15P01624 115 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 APOA1P02647 267 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 PRF1P14222 555 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 PSMB1P20618 241 aaKnown RBP9.5□□□□□ -0.89
ECM1-201ENST00000346569 PTBP1P26599 531 aaKnown RBP eCLIP9.5□□□□□ -0.89
ECM1-201ENST00000346569 BDKRB2P30411 391 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 APLNRP35414 380 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 THBS4P35443 961 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 GNALP38405 381 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 WNT5AP41221 380 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms