RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OR51S1Q8NGJ8 323 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 SLC35E1Q96K37 410 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 VN1R1Q9GZP7 353 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 WDR54Q9H977 334 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 MAP1BP46821 2468 aaKnown RBP9.79□□□□□ -0.84
CLCN6-202ENST00000346436 P2RX6O15547 441 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 PWWP2BQ6NUJ5 590 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 MRGPREQ86SM8 312 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 ZDHHC23Q8IYP9 409 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 C17orf47Q8NEP4 570 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 OR52B4Q8NGK2 314 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 PAQR8Q8TEZ7 354 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 SULT4A1Q9BR01 284 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 NUDT16L1Q9BRJ7 211 aaKnown RBP9.79□□□□□ -0.84
CLCN6-202ENST00000346436 M0R135 149 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 MVDP53602 400 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 RPS16P62249 146 aaKnown RBP9.79□□□□□ -0.84
CLCN6-202ENST00000346436 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
CLCN6-202ENST00000346436 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF79Q15937 498 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 FBXW12Q6X9E4 464 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 SPICQ8N5J4 248 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF799Q96GE5 643 aa9.79□□□□□ -0.84
CLCN6-202ENST00000346436 LY86O95711 162 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF883P0CG24 379 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RPS2P15880 293 aaKnown RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PRRX1P54821 245 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 SHBQ15464 509 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 LCN10Q6JVE6 187 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 LHFPL2Q6ZUX7 228 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 COMTD1Q86VU5 262 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RPEQ96AT9 228 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PBDC1Q9BVG4 233 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 FITM1A5D6W6 292 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 DCTDP32321 178 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 CCR9P51686 369 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 TAS2R30P59541 319 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 TNFAIP6P98066 277 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 SLC9A3R2Q15599 337 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PRTGQ2VWP7 1150 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 CD276Q5ZPR3 534 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RFPL4BQ6ZWI9 263 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 OR5D18Q8NGL1 313 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 GRAMD2BQ96HH9 432 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ARHGDIGQ99819 225 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ADAM19Q9H013 955 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RGCCQ9H4X1 137 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PLEKHF2Q9H8W4 249 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RP1L1Q8IWN7 2480 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 NCBP2LA6PVI3 153 aaKnown RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 F6UZH7 168 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 P2RY10O00398 339 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 HSPB6O14558 160 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 LALBAP00709 142 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ABCD3P28288 659 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RAP2BP61225 183 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 BTG1P62324 171 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 TNK1Q13470 666 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 GLYATL3Q5SZD4 288 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 FAM71CQ8NEG0 241 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PIK3IP1Q96FE7 263 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 ACKR4Q9NPB9 350 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 OCIAD1Q9NX40 245 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 IL20Q9NYY1 176 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 RNF150Q9ULK6 438 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 BRCA1P38398 1863 aaKnown RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PIKFYVEQ9Y2I7 2098 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 F8W036 122 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 GPR12P47775 334 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 BLOC1S1P78537 153 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 DMRTC1Q5HYR2 192 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 KIRREL2Q6UWL6 708 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 UBE3DQ7Z6J8 389 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 SMIM3Q9BZL3 60 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PTTG3PQ9NZH4 202 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-202ENST00000346436 MYOFQ9NZM1 2061 aa9.78□□□□□ -0.84
CLCN6-202ENST00000346436 IGHV5-51A0A0C4DH38 117 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 F2RL2O00254 374 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 CCL4P13236 92 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 RFX2P48378 723 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF616Q08AN1 781 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 Q8IYB0 196 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 WDR34Q96EX3 536 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 ZC3H10Q96K80 434 aaKnown RBP9.77□□□□□ -0.84
CLCN6-202ENST00000346436 FOXB1Q99853 325 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 SELENOIQ9C0D9 397 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 PIGMQ9H3S5 423 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 EHFQ9NZC4 300 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 OR52A1Q9UKL2 312 aa9.77□□□□□ -0.84
CLCN6-202ENST00000346436 MN1Q10571 1320 aaPredicted RBP9.77□□□□□ -0.84
CLCN6-202ENST00000346436 MEIKINA0A087WXM9 373 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 LAP3P28838 519 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 IRF3Q14653 427 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms