RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 NR0B2Q15466 257 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 MLF2Q15773 248 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 HLA-DRB5Q30154 266 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CALHM3Q86XJ0 350 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 NPWQ8N729 165 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 KIAA1217Q5T5P2 1943 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 PGA4P0DJD7 388 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 PGA5P0DJD9 388 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CEBPDP49716 269 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 DLX1P56177 255 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 SMUG1Q53HV7 270 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CMTM4Q8IZR5 234 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ARRDC1Q8N5I2 433 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 SCCPDHQ8NBX0 429 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 TMEM255BQ8WV15 326 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 GALMQ96C23 342 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ADAT3Q96EY9 351 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 BANF2Q9H503 90 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 TRPM6Q9BX84 2022 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ACOT8O14734 319 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 FPR2P25090 351 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 HOXC5Q00444 222 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 MRM1Q6IN84 353 aaKnown RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 LRFN3Q9BTN0 628 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ULBP3Q9BZM4 244 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 EPHX3Q9H6B9 360 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 FOXJ3Q9UPW0 622 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 PDE6DO43924 150 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ARR3P36575 388 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 PAFAH1B2P68402 229 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CLEC12BQ2HXU8 276 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 SLC35E4Q6ICL7 350 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 UBTD2Q8WUN7 234 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 TEX101Q9BY14 249 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ZNF142P52746 1687 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 FGF18O76093 207 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 PRSS1P07477 247 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CLEC2LP0C7M8 214 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CD96P40200 585 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 ERVFRD-1P60508 538 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 RHOBP62745 196 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 HTRA3P83110 453 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 RIGQ13278 110 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 GPNMBQ14956 572 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 OR1C1Q15619 314 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CTF1Q16619 201 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 LHFPL5Q8TAF8 219 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 DOK4Q8TEW6 326 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 NXPE3Q969Y0 559 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 LRRC3BQ96PB8 259 aa7.6□□□□□ -1.19
MCPH1-201ENST00000344683 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-201ENST00000344683 SIAH2O43255 324 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 PTGFRP43088 359 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SSR4P51571 173 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 WDTC1Q8N5D0 677 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 PECRQ9BY49 303 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 MRPL37Q9BZE1 423 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SLAMF8Q9P0V8 285 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 CORTO00230 105 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 CA2P00918 260 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 RPL27P61353 136 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 TMEM176BQ3YBM2 270 aaPredicted RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 DPPA3Q6W0C5 159 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 Q6ZPB1 254 aaPredicted RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 OR4F17Q8NGA8 305 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 OR1L4Q8NGR5 311 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 EGLN2Q96KS0 407 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 ZNF583Q96ND8 569 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 ATOH8Q96SQ7 321 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 ZNF385DQ9H6B1 395 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 PLSCR3Q9NRY6 295 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 ADRA1AP35348 466 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 APOBEC1P41238 236 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SULT1A1P50225 295 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 IL13RA2Q14627 380 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 HNRNPA1L2Q32P51 320 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 OR2B11Q5JQS5 317 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 H1FNTQ75WM6 255 aaPredicted RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 RABEPKQ7Z6M1 372 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SYS1Q8N2H4 156 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 DEFB119Q8N690 84 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 FAM71CQ8NEG0 241 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 MRPS24Q96EL2 167 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 RNF2Q99496 336 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 GPA33Q99795 319 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 PAM16Q9Y3D7 125 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 PRAMEF26H0Y7S4 382 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 CRHP06850 196 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 NID1P14543 1247 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 EPHA2P29317 976 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 CD226Q15762 336 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 CA5BP1Q8WTZ4 195 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 TEAD3Q99594 435 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 NUDT16L1Q9BRJ7 211 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SMG9Q9H0W8 520 aaKnown RBP7.59□□□□□ -1.19
MCPH1-201ENST00000344683 SMDT1Q9H4I9 107 aa7.59□□□□□ -1.19
MCPH1-201ENST00000344683 ECM29Q5VYK3 1845 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms