RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ROM1Q03395 351 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GABRA6Q16445 453 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CBLN2Q8IUK8 224 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 LPPQ93052 612 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MTHFD2LQ9H903 347 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 J3QLW9 94 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PPP1R11O60927 126 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF19P17023 458 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PCBP4P57723 403 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SYPL1Q16563 259 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NXNL2Q5VZ03 156 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ALKAL1Q6UXT8 129 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF514Q96K75 400 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 DDOQ99489 341 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CYSLTR1Q9Y271 337 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SIGLEC7Q9Y286 467 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GPR55Q9Y2T6 319 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 FZD9O00144 591 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TAPBPO15533 448 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 HNRNPA1P09651 372 aaKnown RBP eCLIP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 AOAHP28039 575 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TBPL1P62380 186 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF626Q68DY1 528 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 EGLN3Q9H6Z9 239 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PGPEP1LA6NFU8 196 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NKX6-3A6NJ46 265 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 C6orf47O95873 294 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CCR5P51681 352 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ADIGQ0VDE8 80 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 COL9A3Q14050 684 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SEH1LQ96EE3 360 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MRIQ9BWK5 157 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ACER3Q9NUN7 267 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 YBX2Q9Y2T7 364 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MROH2AA6NES4 1674 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SERTM2A0A1B0GWG4 89 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SERTM1A2A2V5 107 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF26H0Y7S4 382 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF11O60813 436 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CD5P06127 495 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ARAFP10398 606 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GABRA3P34903 492 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL58Q14197 206 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SLBPQ14493 270 aaKnown RBP eCLIP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 THOC6Q86W42 341 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR1L3Q8NH93 324 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 FCRL5Q96RD9 977 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 FGF20Q9NP95 211 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 BLACEA4D250 179 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 M0QYG6 137 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 HTR1FP30939 366 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CASP7P55210 303 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 Q1RN00 199 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SLC22A6Q4U2R8 563 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ADAMTS18Q8TE60 1221 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RAB1CQ92928 201 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TOMM40LQ969M1 308 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SPSB4Q96A44 273 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 IGSF21Q96ID5 467 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GABRG3Q99928 467 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 DUSP15Q9H1R2 295 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 AGO3Q9H9G7 860 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ATXN7O15265 892 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 METAP1P53582 386 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SRSF6Q13247 344 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NPY5RQ15761 445 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 VSIG10LQ86VR7 867 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PGAM5Q96HS1 289 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NRIP2Q9BQI9 281 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 DERL1Q9BUN8 251 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 B3GAT2Q9NPZ5 323 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MT-CO1P00395 513 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ALDOAP04075 364 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 Q6ZSR9 355 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR2M3Q8NG83 312 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CDS1Q92903 461 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RSPO3Q9BXY4 272 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 COLEC10Q9Y6Z7 277 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C1RP00736 705 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SP9P0CG40 484 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CD79AP11912 226 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ICAM3P32942 547 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CD226Q15762 336 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MANEAQ5SRI9 462 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL21Q7Z2W9 205 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 WDR89Q96FK6 387 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NIP7Q9Y221 180 aaKnown RBP eCLIP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 FREM1Q5H8C1 2179 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GYG1P46976 350 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RPS25P62851 125 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MS4A6EQ96DS6 147 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NAA11Q9BSU3 229 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GPX3P22352 226 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ATP6V0CP27449 155 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HSPB3Q12988 150 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MPV17LQ2QL34 196 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TRMT12Q53H54 448 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms