RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SNAI1O95863 264 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 PRH1P02810 166 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 SOD2P04179 222 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 CHRM2P08172 466 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 OR5H8P0DN80 308 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 NID1P14543 1247 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ST6GAL1P15907 406 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 FUT1P19526 365 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RPS4Y1P22090 263 aaKnown RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 THBS4P35443 961 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 GNALP38405 381 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 TSFMP43897 325 aaKnown RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RAP1BP61224 184 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RPP30P78346 268 aaKnown RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RAB32Q13637 225 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RAB35Q15286 201 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ODF4Q2M2E3 257 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 TRAPPC6BQ86SZ2 158 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF679Q8IYX0 411 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 KIR2DL5AQ8N109 375 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 NKAIN3Q8N8D7 197 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 OR52E1Q8NGJ3 308 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 OR51F2Q8NH61 342 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 AQP3Q92482 292 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 C16orf58Q96GQ5 468 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 MRGPRX3Q96LB0 322 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ADAD1Q96M93 576 aaKnown RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 GNRHR2Q96P88 292 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 GINS3Q9BRX5 216 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ANGPTL4Q9BY76 406 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 NMNAT2Q9BZQ4 307 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 RIMS4Q9H426 269 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-201ENST00000343524 CHST11Q9NPF2 352 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 DLL3Q9NYJ7 618 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 FRRS1LQ9P0K9 344 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 CD84Q9UIB8 345 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 VAX2Q9UIW0 290 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ENTPD2Q9Y5L3 495 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 KCNE3Q9Y6H6 103 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF780BQ9Y6R6 833 aa7.28□□□□□ -1.24
ATG4A-201ENST00000343524 MAP1BP46821 2468 aaKnown RBP7.27□□□□□ -1.24
ATG4A-201ENST00000343524 USP24Q9UPU5 2620 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FIGNL2A6NMB9 653 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FAM171A2A8MVW0 826 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FTCDNL1E5RQL4 147 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 COCHO43405 550 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 KCNAB3O43448 404 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CDC14BO60729 498 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 RPP14O95059 124 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 KLKB1P03952 638 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OPN1MWP04001 364 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 APODP05090 189 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CSN2P05814 226 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CST2P09228 141 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CXCL1P09341 107 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OPN1MW2P0DN77 364 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OPN1MW3P0DN78 364 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OR13C7P0DN81 318 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FPR2P25090 351 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FCGR2CP31995 323 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 RPL4P36578 427 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 MC3RP41968 323 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 P2RY1P47900 373 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 BEX3Q00994 111 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 EIF2B1Q14232 305 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CEBPEQ15744 281 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 MFSD12Q6NUT3 480 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FDX2Q6P4F2 183 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 BTNL3Q6UXE8 466 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SLC25A26Q70HW3 274 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TTC9BQ8N6N2 239 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SLC35G3Q8N808 338 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OR10A7Q8NGE5 316 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OR1P1Q8NH06 330 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ROBO4Q8WZ75 1007 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FAM46BQ96A09 425 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 MS4A6EQ96DS6 147 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF514Q96K75 400 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 Q96M85 177 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 KXD1Q9BQD3 176 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 NUDT9Q9BW91 350 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 MKKSQ9NPJ1 570 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 LRFN1Q9P244 771 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FASNP49327 2511 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ANKRD11Q6UB99 2663 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TRBV24-1A0A075B6N3 115 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1W2PS29 197 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 CLDN34H7C241 214 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 H7C4K7 107 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 PEX12O00623 359 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ABHD16AO95870 558 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TBX6O95947 436 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 HSPB1P04792 205 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms