RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DANCRP0C864 163 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 RNH1P13489 461 aaKnown RBP8.59□□□□□ -1.03
HOXA1-201ENST00000343060 HIST1H1DP16402 221 aaKnown RBP8.59□□□□□ -1.03
HOXA1-201ENST00000343060 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
HOXA1-201ENST00000343060 ZP2Q05996 745 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 AADACL3Q5VUY0 350 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 OR2A2Q6IF42 318 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 HEPN1Q6WQI6 88 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 MARCH3Q86UD3 253 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 SPACA1Q9HBV2 294 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 FAM212BQ9NTI7 297 aaPredicted RBP8.59□□□□□ -1.03
HOXA1-201ENST00000343060 PRR13Q9NZ81 148 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 SRPK3Q9UPE1 567 aa8.59□□□□□ -1.03
HOXA1-201ENST00000343060 LOC101059948A0A1B0GTJ6 334 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 RHPN2P1A8MT19 583 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 C11orf98E9PRG8 122 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 DEDDO75618 318 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 DXOO77932 396 aaKnown RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 TSPAN15O95858 294 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CRABP1P29762 137 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CDX1P47902 265 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 MMP16P51512 607 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 GLO1Q04760 184 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SURF2Q15527 256 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 TOMM34Q15785 309 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 MIDNQ504T8 468 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF761Q86XN6 746 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FAM24BQ8N5W8 94 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SLC26A10Q8NG04 563 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CCL4L1Q8NHW4 92 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 C1orf147Q96MC9 270 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CHST5Q9GZS9 411 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 PRODH2Q9UF12 536 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ALPK2Q86TB3 2170 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 A0A0A6YYC8 382 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 I3L1I5 382 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 K7EPK0 472 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 M0R036 132 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 P2RY10O00398 339 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SCDO00767 359 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 BCAT2O15382 392 aaPredicted RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 NPIPB7O75200 414 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 UTS2O95399 124 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SEC11BP0C7V7 166 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ITGA3P26006 1051 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 GALNSP34059 522 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ACTR1BP42025 376 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 EMP2P54851 167 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 CLDN6P56747 220 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 S100A10P60903 97 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF117Q03924 483 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 PLAC9Q5JTB6 97 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 C9orf152Q5JTZ5 239 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 NCMAPQ5T1S8 102 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 C1QL3Q5VWW1 255 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FAM219AQ8IW50 185 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 ADAMTS18Q8TE60 1221 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 GTF3AQ92664 365 aaKnown RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SGK3Q96BR1 496 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FGGYQ96C11 551 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 PFDN5Q99471 154 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SPSB2Q99619 263 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 NICN1Q9BSH3 213 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 RAB33BQ9H082 229 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 METTL8Q9H825 291 aaKnown RBP8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SLC2A4RGQ9NR83 387 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 STARD5Q9NSY2 213 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FAM206AQ9NX38 181 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 SUSD2Q9UGT4 822 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
HOXA1-201ENST00000343060 FREM3P0C091 2139 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 TMEM269A0A1B0GVZ9 245 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 A0A1W2PPE2 198 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 ST8SIA5O15466 376 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 HCRTR1O43613 425 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 IFNA2P01563 188 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 SLC2A1P11166 492 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 DAOP14920 347 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 FCGR2CP31995 323 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 OR2B8PP59922 312 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 RPS23P62266 143 aaKnown RBP8.57□□□□□ -1.04
HOXA1-201ENST00000343060 BIKQ13323 160 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 NFATC4Q14934 902 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 Q3ZCU0 254 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 FAM78AQ5JUQ0 283 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 C1orf140Q5VVS0 124 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF776Q68DI1 518 aaPredicted RBP8.57□□□□□ -1.04
HOXA1-201ENST00000343060 ADAM5Q6NVV9 412 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 PSRC1Q6PGN9 363 aaPredicted RBP8.57□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF574Q6ZN55 896 aaPredicted RBP8.57□□□□□ -1.04
HOXA1-201ENST00000343060 PPP1R3BQ86XI6 285 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 LILRB2Q8N423 598 aa8.57□□□□□ -1.04
HOXA1-201ENST00000343060 OR5H2Q8NGV7 314 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms