RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 DRAM2Q6UX65 266 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 ST7LQ8TDW4 575 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 PTX4Q96A99 478 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 A0A0A6YYD4 124 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 PLPP3O14495 311 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 SOCS1O15524 211 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 PPT1P50897 306 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 CAV2P51636 162 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 GFERP55789 205 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 TMEM128Q5BJH2 165 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 C1orf140Q5VVS0 124 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 ZNF704Q6ZNC4 412 aaPredicted RBP19.88■□□□□ 0.77
TRIM28-202ENST00000341753 PRSS58Q8IYP2 241 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 TERB2Q8NHR7 220 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 C8orf33Q9H7E9 229 aaPredicted RBP19.88■□□□□ 0.77
TRIM28-202ENST00000341753 ASXL3Q9C0F0 2248 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 IFNA4P05014 189 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 HOXB5P09067 269 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 TMEM151BQ8IW70 566 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 SLC26A10Q8NG04 563 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 ADAMTS17Q8TE56 1095 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.88■□□□□ 0.77
TRIM28-202ENST00000341753 MAFIPQ8WZ33 124 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 TBL1XR1Q9BZK7 514 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 VPS13AQ96RL7 3174 aa19.88■□□□□ 0.77
TRIM28-202ENST00000341753 NSA2O95478 260 aaKnown RBP19.87■□□□□ 0.77
TRIM28-202ENST00000341753 MPIG6BO95866 241 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 HSD17B7P56937 341 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 IGSF11Q5DX21 431 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 TMEM244Q5VVB8 128 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 KLHDC7BQ96G42 594 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 TMEM41AQ96HV5 264 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 AKR1E2Q96JD6 320 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 SOX7Q9BT81 388 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 MED29Q9NX70 200 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 FLVCR1Q9Y5Y0 555 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 FAM221BA6H8Z2 402 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 C2orf72A6NCS6 295 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 SDCBPO00560 298 aaPredicted RBP19.87■□□□□ 0.77
TRIM28-202ENST00000341753 SYT7O43581 403 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 DXOO77932 396 aaKnown RBP19.87■□□□□ 0.77
TRIM28-202ENST00000341753 ISG15P05161 165 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 BCKDHBP21953 392 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 OR1D4P47884 311 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 CYCSP99999 105 aaKnown RBP19.87■□□□□ 0.77
TRIM28-202ENST00000341753 PLAC9Q5JTB6 97 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 PRSS54Q6PEW0 395 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 MISPQ8IVT2 679 aa19.87■□□□□ 0.77
TRIM28-202ENST00000341753 ZNF354AO60765 605 aaPredicted RBP19.86■□□□□ 0.77
TRIM28-202ENST00000341753 TTRP02766 147 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 HEXAP06865 529 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SLC6A8P48029 635 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 RAB5BP61020 215 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SUPT4H1P63272 117 aaKnown RBP19.86■□□□□ 0.77
TRIM28-202ENST00000341753 DHRS11Q6UWP2 260 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SLC22A24Q8N4F4 322 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 NAA11Q9BSU3 229 aaPredicted RBP19.86■□□□□ 0.77
TRIM28-202ENST00000341753 ABCA7Q8IZY2 2146 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 TRAV20A0A0B4J274 112 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 A0A1W2PPE3 182 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 RAD51DO75771 328 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SFTPBP07988 381 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 CPT2P23786 658 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 TGM7Q96PF1 710 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SULT4A1Q9BR01 284 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 SLC5A7Q9GZV3 580 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 TAF9BQ9HBM6 251 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 PLA2G2EQ9NZK7 142 aa19.86■□□□□ 0.77
TRIM28-202ENST00000341753 NUDT19A8MXV4 375 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SFT2D2O95562 160 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 ABCD3P28288 659 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 CRABP1P29762 137 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 TAS2R31P59538 309 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 FAM76BQ5HYJ3 339 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 LMX1AQ8TE12 382 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 ZNF775Q96BV0 537 aaPredicted RBP19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SMIM3Q9BZL3 60 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SEC61A2Q9H9S3 476 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 GPR132Q9UNW8 380 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 FABP1P07148 127 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SLC2A1P11166 492 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 GLRA1P23415 457 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 CLDN6P56747 220 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SLC26A5P58743 744 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SMCO1Q147U7 214 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 OR2A2Q6IF42 318 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 COMMD2Q86X83 199 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 ISOC2Q96AB3 205 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SMIM8Q96KF7 97 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 SOHLH2Q9NX45 425 aa19.85■□□□□ 0.77
TRIM28-202ENST00000341753 ARPC4-TTLL3A0A0A6YYG9 625 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 BPNT1O95861 308 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 MT-ATP6P00846 226 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 HSD11B1P28845 292 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 ZNF93P35789 620 aaPredicted RBP19.84■□□□□ 0.77
TRIM28-202ENST00000341753 FAM209BQ5JX69 171 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 GLIPR1L1Q6UWM5 242 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 NAA40Q86UY6 237 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 DTWD2Q8NBA8 298 aa19.84■□□□□ 0.77
TRIM28-202ENST00000341753 SECTM1Q8WVN6 248 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms