RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 CD69Q07108 199 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 IKZF1Q13422 519 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 TBPL2Q6SJ96 375 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 WDR86Q86TI4 376 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 LINC00346Q8IVM7 164 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 CMTM4Q8IZR5 234 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 MREGQ8N565 214 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 DPP10Q8N608 796 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 PLPP7Q8NBV4 271 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 OR2AE1Q8NHA4 323 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 SLC7A13Q8TCU3 470 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 NKX3-1Q99801 234 aaPredicted RBP13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 J3KTA2 159 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 GMDSO60547 372 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 BMXP51813 675 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 COL10A1Q03692 680 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 ZNF92Q03936 586 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 MRPL21Q7Z2W9 205 aaKnown RBP13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 ACOT11Q8WXI4 607 aaPredicted RBP13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 PNRC2Q9NPJ4 139 aaKnown RBP13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 BAG5Q9UL15 447 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 SNX13Q9Y5W8 968 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
NECTIN1-202ENST00000340882 A0A1W2PRX2 142 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 CDKN2AP42771 156 aaKnown RBP13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 TGM4P49221 684 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 CENPAP49450 140 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 MALLQ13021 153 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 LRRC75BQ2VPJ9 315 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 ANKDD1AQ495B1 522 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 FAM156AQ8NDB6 213 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 OR5T2Q8NGG2 359 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 OR51G2Q8NGK0 314 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 C8orf46Q8TAG6 207 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 LRRC29Q8WV35 223 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 PRRC1Q96M27 445 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 B9D2Q9BPU9 175 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 CCDC28BQ9BUN5 200 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 SLC22A4Q9H015 551 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 MEGF9Q9H1U4 602 aa13.27□□□□□ -0.29
NECTIN1-202ENST00000340882 A0A087WUU8 490 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 HTR3EA5X5Y0 456 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 SOCS2O14508 198 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 FFAR1O14842 300 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 TRAP1Q12931 704 aaKnown RBP13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 NFYCQ13952 458 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 ZBED5Q49AG3 693 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 SLC18B1Q6NT16 456 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 Q6ZS46 218 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 PAPD5Q8NDF8 572 aaKnown RBP13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 DMRTB1Q96MA1 342 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 OR5M11Q96RB7 305 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 AURKCQ9UQB9 309 aa13.26□□□□□ -0.29
NECTIN1-202ENST00000340882 IGLV1-36A0A0B4J1U3 117 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 NDUFB3O43676 98 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 MUC1P15941 1255 aaPredicted RBP13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 SDHAP31040 664 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 HOXD3P31249 432 aaPredicted RBP13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 CSNK2BP67870 215 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 MICBQ29980 383 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 CYBRD1Q53TN4 286 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 GLYATL3Q5SZD4 288 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 Q8N2B8 174 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 LNX2Q8N448 690 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 DDOQ99489 341 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 PITX2Q99697 317 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 ATF6BQ99941 703 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 WNT10AQ9GZT5 417 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 FAM234AQ9H0X4 552 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 IER3IP1Q9Y5U9 82 aa13.25□□□□□ -0.29
NECTIN1-202ENST00000340882 GGT3PA6NGU5 568 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 PTP4A3O75365 173 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 GGT2P36268 569 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 FXYD6P3P58550 94 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 NCR3LG1Q68D85 454 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 NANOGP8Q6NSW7 305 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 WDR82Q6UXN9 313 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 TMPRSS11FQ6ZWK6 438 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 SLC36A1Q7Z2H8 476 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 TSEN54Q7Z6J9 526 aaKnown RBP13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 OFCC1Q8IZS5 231 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 RAB18Q9NP72 206 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 MRPL15Q9P015 296 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms