RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 NTN3O00634 580 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PPP1R2P9O14990 202 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 CYTIPO60759 359 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 DUS4LO95620 317 aaKnown RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ONECUT2O95948 504 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 QDPRP09417 244 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR2T7P0C7T2 308 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 MAOAP21397 527 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 CCR5P51681 352 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SLC25A1P53007 311 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PTTG1IPP53801 180 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 MANFP55145 182 aaKnown RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 CFHR1Q03591 330 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNHIT3Q15649 155 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 GUK1Q16774 197 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PRAMEF14Q5SWL7 426 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PRAMEF8Q5VWM4 474 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PRAMEF7Q5VXH5 474 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 FAHD2BQ6P2I3 314 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PRSS54Q6PEW0 395 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 UBE3DQ7Z6J8 389 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF433Q8N7K0 673 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 CYB561A3Q8NBI2 242 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR2T27Q8NH04 317 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR51F2Q8NH61 342 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF480Q8WV37 535 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ANKRD9Q96BM1 317 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 FAHD2AQ96GK7 314 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SHDQ96IW2 340 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 Q96M85 177 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 NRTNQ99748 197 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR51B6Q9H340 312 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 DPEP2Q9H4A9 486 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 CDH20Q9HBT6 801 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 COMMD9Q9P000 198 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SLC7A7Q9UM01 511 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SIT1Q9Y3P8 196 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 GPR179Q6PRD1 2367 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 HSD17B6O14756 317 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 TMPRSS11DO60235 418 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PNLIPP16233 465 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SERPINF1P36955 418 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 GABRA4P48169 554 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 TAS2R19P59542 299 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 USF2Q15853 346 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 HAGHQ16775 308 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 COA6Q5JTJ3 125 aaKnown RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 HIST2H3PS2Q5TEC6 136 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 DMRTA1Q5VZB9 504 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF529Q6P280 563 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OGFOD3Q6PK18 319 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 LYPD6Q86Y78 171 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF573Q86YE8 665 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 FAM219AQ8IW50 185 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 C9orf40Q8IXQ3 194 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 APCDD1LQ8NCL9 501 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR51A4Q8NGJ6 313 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR5AK2Q8NH90 309 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 RNF128Q8TEB7 428 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM230Q96A57 120 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 OR51V1Q9H2C8 321 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF107Q9UII5 783 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 PADI1Q9ULC6 663 aa4.97□□□□□ -1.61
CSDE1-202ENST00000339438 NOP16Q9Y3C1 178 aaKnown RBP4.97□□□□□ -1.61
CSDE1-202ENST00000339438 SPTBN2O15020 2390 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 A0A1W2PS29 197 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 DUXAA6NLW8 204 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 FCMRO60667 390 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.61
CSDE1-202ENST00000339438 DANCRP0C864 163 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 FGF7P21781 194 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 PTGER1P34995 402 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 MAPK8P45983 427 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 SPINT3P49223 89 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ACTA2P62736 377 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ACTG2P63267 376 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 SUPT4H1P63272 117 aaKnown RBP4.96□□□□□ -1.61
CSDE1-202ENST00000339438 DPTQ07507 201 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 C14orf28Q4W4Y0 310 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF542PQ5EBM4 170 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF311Q5JNZ3 666 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 GGNBP1Q5YKI7 109 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF585AQ6P3V2 769 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 ERN2Q76MJ5 926 aaKnown RBP4.96□□□□□ -1.61
CSDE1-202ENST00000339438 RABEPKQ7Z6M1 372 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 SLC35E3Q7Z769 313 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 CD163Q86VB7 1156 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 LINC01555Q8NAE3 123 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 OR10AC1Q8NH08 325 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 CXorf40AQ8TE69 158 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 CCDC74AQ96AQ1 378 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 C16orf58Q96GQ5 468 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 SERINC2Q96SA4 455 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 TAF9BQ9HBM6 251 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 RNF115Q9Y4L5 304 aa4.96□□□□□ -1.61
CSDE1-202ENST00000339438 EDDM13A0A1B0GTR0 161 aa4.96□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM235A6NFC5 223 aa4.96□□□□□ -1.62
CSDE1-202ENST00000339438 CDRT15L2A8MXV6 281 aa4.96□□□□□ -1.62
CSDE1-202ENST00000339438 RTCAO00442 366 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms