RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF75AQ96N20 296 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 WDR12Q9GZL7 423 aaKnown RBP12.75□□□□□ -0.37
CBX3-201ENST00000337620 MIXL1Q9H2W2 232 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 PLGRKTQ9HBL7 147 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 AIPO00170 330 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 MSTNO14793 375 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 CELA3BP08861 270 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 IL32P24001 234 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 IDH3GP51553 393 aaPredicted RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 PRSS12P56730 875 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 SPANXN2Q5MJ10 180 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 ZNF671Q8TAW3 534 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 ZFAND2BQ8WV99 257 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 ZNF629Q9UEG4 869 aaPredicted RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 PIGLQ9Y2B2 252 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 A8MXE2 369 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 ZNF14P17017 642 aaPredicted RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 DDOSTP39656 456 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 CLDN12P56749 244 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 ZNF92Q03936 586 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 COLCA1Q6ZS62 124 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 PAQR4Q8N4S7 273 aaPredicted RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 NKX3-1Q99801 234 aaPredicted RBP12.74□□□□□ -0.37
CBX3-201ENST00000337620 PIGMQ9H3S5 423 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 V9GYS6 101 aa12.74□□□□□ -0.37
CBX3-201ENST00000337620 FAHP16930 419 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 RAB3AP20336 220 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 TBC1D28Q2M2D7 210 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 CCDC190Q86UF4 302 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
CBX3-201ENST00000337620 SAMD12Q8N8I0 201 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 OR1M1Q8NGA1 313 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 RND1Q92730 232 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 APOBEC3DQ96AK3 386 aaPredicted RBP12.73□□□□□ -0.37
CBX3-201ENST00000337620 VKORC1Q9BQB6 163 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 OR51B6Q9H340 312 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 OSGIN2Q9Y236 505 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 XRCC2O43543 280 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 NGFP01138 241 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 CBR1P16152 277 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 BDKRB2P30411 391 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 LIX1LQ8IVB5 337 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 SEMA6DQ8NFY4 1073 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.37
CBX3-201ENST00000337620 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 RGCCQ9H4X1 137 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 ZNF391Q9UJN7 358 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 STARD10Q9Y365 291 aa12.73□□□□□ -0.37
CBX3-201ENST00000337620 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 ZNF45Q02386 682 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 FAM27E3Q08E93 113 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 MALLQ13021 153 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 MADCAM1Q13477 382 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
CBX3-201ENST00000337620 ALKBH2Q6NS38 261 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 MRGPRGQ86SM5 289 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 ZNF101Q8IZC7 436 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 CCDC54Q8NEL0 328 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 CDH20Q9HBT6 801 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 TMEM138Q9NPI0 162 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 CGGBP1Q9UFW8 167 aaPredicted RBP12.72□□□□□ -0.37
CBX3-201ENST00000337620 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
CBX3-201ENST00000337620 LOC390937A0A1W2PQ73 354 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 OCMP0CE72 109 aaPredicted RBP12.71□□□□□ -0.37
CBX3-201ENST00000337620 ACKR3P25106 362 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 WNT5AP41221 380 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 CA7P43166 264 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 MAP2K3P46734 347 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 GSK3AP49840 483 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 FAM3AP98173 230 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 RIPPLY1Q0D2K3 151 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 MRPL49Q13405 166 aaKnown RBP12.71□□□□□ -0.37
CBX3-201ENST00000337620 DYNC1I2Q13409 638 aaKnown RBP12.71□□□□□ -0.37
CBX3-201ENST00000337620 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 Q6ZSR3 168 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 OR52N4Q8NGI2 321 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 BORCS5Q969J3 196 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 DMRTA2Q96SC8 542 aa12.71□□□□□ -0.37
CBX3-201ENST00000337620 OBP2BQ9NPH6 170 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms