RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 JAM3Q9BX67 310 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 DUSP5Q16690 384 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 TBC1D28Q2M2D7 210 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 NHLRC1Q6VVB1 395 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 C17orf78Q8N4C9 275 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 PRRX2Q99811 253 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 FGF20Q9NP95 211 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 M0R2Z0 102 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 GPR37O15354 613 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 TOX3O15405 576 aaPredicted RBP8.9□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF217O75362 1048 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 PCP4P48539 62 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 FOXC1Q12948 553 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 MYBPHQ13203 477 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 HNRNPA1L2Q32P51 320 aaKnown RBP8.9□□□□□ -0.99
COL4A6-201ENST00000334504 TMEM128Q5BJH2 165 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 FAHD1Q6P587 224 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 CSF3RQ99062 836 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 FAM166BA8MTA8 275 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 M0R082 166 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 NDUFB6O95139 128 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 TIAL1Q01085 375 aaKnown RBP eCLIP8.9□□□□□ -0.99
COL4A6-201ENST00000334504 AWAT1Q58HT5 328 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 LRFN3Q9BTN0 628 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 FOXJ3Q9UPW0 622 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 RNF24Q9Y225 148 aa8.9□□□□□ -0.99
COL4A6-201ENST00000334504 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 RPS16P62249 146 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 FAM3AP98173 230 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF816Q0VGE8 651 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 INPP5JQ15735 1006 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 CCSMST1Q4G0I0 132 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 BVESQ8NE79 360 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 LHFPL5Q8TAF8 219 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 GPR137Q96N19 417 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 TAAR6Q96RI8 345 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 CHST6Q9GZX3 395 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 GPR84Q9NQS5 396 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MYH13Q9UKX3 1938 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 FZD6O60353 706 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 EIF1BO60739 113 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SLC35E2P0CK97 266 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SSR4P51571 173 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 PAX5Q02548 391 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 GSG1Q2KHT4 349 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SEZ6L2Q6UXD5 910 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 BTNL3Q6UXE8 466 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 DEFB123Q8N688 67 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 RDH5Q92781 318 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ARRDC3Q96B67 414 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 OR10C1Q96KK4 312 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 HMX2A2RU54 273 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 H3BVH4 76 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 CTSAP10619 480 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 GLB1P16278 677 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 EPHA2P29317 976 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 TPBGQ13641 420 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 FFAR4Q5NUL3 377 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 OTPQ5XKR4 325 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MRM1Q6IN84 353 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MUC20Q8N307 709 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 GOT1L1Q8NHS2 421 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ADGRG7Q96K78 797 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 R4GMQ9 66 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 PLPP1O14494 284 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SH2D1BO14796 132 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 EDN1P05305 212 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 CYBAP13498 195 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF250P15622 560 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF385BQ569K4 471 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 LAIR1Q6GTX8 287 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 FBXO46Q6PJ61 603 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 HSD17B13Q7Z5P4 300 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MS4A7Q9GZW8 240 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 TWSG1Q9GZX9 223 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 LANCL2Q9NS86 450 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 IGKV6D-21A0A0A0MT36 114 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 HELTA6NFD8 242 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF737O75373 536 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 NID1P14543 1247 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 RPS27P42677 84 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 ERHP84090 104 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 CLLU1OSQ5K130 101 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 DHRS13Q6UX07 377 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SLC39A5Q6ZMH5 540 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 EDAQ92838 391 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 NPAS1Q99742 590 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 PBOV1Q9GZY1 135 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 C12orf49Q9H741 205 aa8.89□□□□□ -0.99
COL4A6-201ENST00000334504 XRN1Q8IZH2 1706 aaKnown RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.89□□□□□ -0.99
COL4A6-201ENST00000334504 A0A1W2PPE2 198 aa8.88□□□□□ -0.99
COL4A6-201ENST00000334504 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
COL4A6-201ENST00000334504 DAOP14920 347 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms