RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TXN2Q99757 166 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KCNS3Q9BQ31 491 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CHCHD7Q9BUK0 85 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TSSK6Q9BXA6 273 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 COMMD4Q9H0A8 199 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ATG10Q9H0Y0 220 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 DPH5Q9H2P9 285 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 POLE4Q9NR33 117 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CTPS2Q9NRF8 586 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 DCAF13Q9NV06 445 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PRR13Q9NZ81 148 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 BTNL2Q9UIR0 455 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CHKBQ9Y259 395 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 IFT52Q9Y366 437 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CFAP20Q9Y6A4 193 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00312Q9Y6C7 94 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 GOLGB1Q14789 3259 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SAC3D1A6NKF1 404 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FAM166BA8MTA8 275 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FAM227AF5H4B4 570 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AP4M1O00189 453 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF264O43296 627 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PCDH7O60245 1069 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TSC22D2O75157 780 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NDUFS6O75380 124 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KLHL2O95198 593 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 LPLP06858 475 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FAM58BPP0C7Q3 252 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SEC11BP0C7V7 166 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CD36P16671 472 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SAT1P21673 171 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PPIBP23284 216 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PAX6P26367 422 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 UCP2P55851 309 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ARL4CP56559 192 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ERVK11-1P61568 191 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CSHL1Q14406 222 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PTGES3Q15185 160 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GSG1Q2KHT4 349 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RFTN2Q52LD8 501 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CLEC12AQ5QGZ9 265 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AGBL2Q5U5Z8 902 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 C1orf189Q5VU69 101 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 METTL21CQ5VZV1 264 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HLA-DQA1Q5Y7H0 255 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF343Q6P1L6 599 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SHISA6Q6ZSJ9 500 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR2W3Q7Z3T1 314 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF329Q86UD4 541 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZC3HC1Q86WB0 502 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF575Q86XF7 245 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF584Q8IVC4 421 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF695Q8IW36 515 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SPARTQ8N0X7 666 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CADM2Q8N3J6 435 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GCSAMQ8N6F7 178 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PAF1Q8N7H5 531 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 POC1AQ8NBT0 407 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CSNK2A3Q8NEV1 391 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ACTL9Q8TC94 416 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AENQ8WTP8 325 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DNAJA4Q8WW22 397 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR5P2Q8WZ92 322 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OSTF1Q92882 214 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 C8orf44Q96CB5 159 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RAX2Q96IS3 184 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ODF3Q96PU9 254 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 EPYCQ99645 322 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 MRPL57Q9BQC6 102 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ERP44Q9BS26 406 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PTDSS2Q9BVG9 487 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TM2D1Q9BX74 207 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IL36GQ9NZH8 169 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PEMTQ9UBM1 199 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KLK11Q9UBX7 282 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CACNG5Q9UF02 275 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GUCA1BQ9UMX6 200 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SNX6Q9UNH7 406 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PPP2R2CQ9Y2T4 447 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SIGLEC9Q9Y336 463 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CCL27Q9Y4X3 112 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TIMM22Q9Y584 194 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PRSS21Q9Y6M0 314 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DOCK11Q5JSL3 2073 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DNAH14Q0VDD8 3507 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SPENQ96T58 3664 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TRBV9A0A0B4J1U6 114 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PABPN1LA6NDY0 278 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF785A8K8V0 405 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 LINC01619G3V211 115 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 G3V2L1 256 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 L7N2F9 121 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SGK494L7N484 410 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SLC28A1O00337 649 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CASQ2O14958 399 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HDAC3O15379 428 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CST8O60676 142 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 BGLAPP02818 100 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CD1DP15813 335 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF823P16415 610 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms