RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 IFITM5A6NNB3 132 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF264O43296 627 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 GPM6AP51674 278 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 EDDM3BP56851 147 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 NR0B2Q15466 257 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 MARCH8Q5T0T0 291 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 BTNL3Q6UXE8 466 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ERASQ7Z444 233 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 OR2T10Q8NGZ9 312 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM191AQ9H0A3 160 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 KIAA1456Q9P272 454 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ZAR1LA6NP61 321 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 CTSAP10619 480 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 S100A4P26447 101 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 NKAIN2Q5VXU1 208 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 LYSMD4Q5XG99 296 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SOWAHBA6NEL2 793 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SDC1P18827 310 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SHC1P29353 583 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 DENND4AQ7Z401 1863 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 ARPC3O15145 178 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 TBXA2RP21731 343 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 OR10AD1Q8NGE0 317 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 OR10X1Q8NGY0 326 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 PDLIM5Q96HC4 596 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 PLEKHF2Q9H8W4 249 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 TMEM184BQ9Y519 407 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 TIMM9Q9Y5J7 89 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SDK2Q58EX2 2172 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 TPBGQ13641 420 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 ARRDC2Q8TBH0 407 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 TSACCQ96A04 125 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 NEURL3Q96EH8 262 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 B3GAT1Q9P2W7 334 aa9.46□□□□□ -0.9
SPTBN1-201ENST00000333896 BCL9O00512 1426 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF593O00488 134 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CYR61O00622 381 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 DDNO94850 711 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 RTL8BQ17RB0 113 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CDC20BQ86Y33 519 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 EMC9Q9Y3B6 208 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TNRC6AQ8NDV7 1962 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CA3P07451 260 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 DGCR2P98153 550 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 GLYATL3Q5SZD4 288 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 IER5LQ5T953 404 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 LIPIQ6XZB0 460 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 SLC16A12Q6ZSM3 486 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CISD2Q8N5K1 135 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 LHX4Q969G2 390 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CACNA1HO95180 2353 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ARID2Q68CP9 1835 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TCN2P20062 427 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 SRP14P37108 136 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CDX1P47902 265 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 OR5M10Q6IEU7 315 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 C22orf39Q6P5X5 142 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 UMODL1-AS1Q8N2C9 162 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ARRDC1Q8N5I2 433 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TMEM229BQ8NBD8 167 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 GPR55Q9Y2T6 319 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 NSG1A0A0A6YYJ2 146 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 SEMA7AO75326 666 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 EXT1Q16394 746 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 FAHD1Q6P587 224 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CDRT4Q8N9R6 151 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 PHOSPHO2Q8TCD6 241 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MSL2Q9HCI7 577 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 LIPGQ9Y5X9 500 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 RRP8O43159 456 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CEBPBP17676 345 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 G6PCP35575 357 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF595Q8IYB9 648 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 OR4C16Q8NGL9 310 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 NAGKQ9UJ70 344 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 BPIFB3P59826 476 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 SLC10A2Q12908 348 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF805Q5CZA5 627 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MIXL1Q9H2W2 232 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 FOXE1O00358 373 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CTDSPLO15194 276 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 FRS3O43559 492 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms