RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 INSL4Q14641 139 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 ZNF846Q147U1 533 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 ZNF829Q3KNS6 432 aaPredicted RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 C3orf36Q3SXR2 165 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 TBRG1Q3YBR2 411 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 ZMAT1Q5H9K5 638 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 C9orf135Q5VTT2 229 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 AGAP6Q5VW22 663 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 CORO6Q6QEF8 472 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 SLC22A25Q6T423 547 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 ZNF676Q8N7Q3 588 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 WDR31Q8NA23 367 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 OR1K1Q8NGR3 316 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 MAP6Q96JE9 813 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 C4orf45Q96LM5 186 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 DCLRE1CQ96SD1 692 aaKnown RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 SMR3AQ99954 134 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 PDCD1LG2Q9BQ51 273 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 TPK1Q9H3S4 243 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 PLGRKTQ9HBL7 147 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 HMG20AQ9NP66 347 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 ZNF701Q9NV72 531 aaPredicted RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 CISD1Q9NZ45 108 aaKnown RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 FRRS1LQ9P0K9 344 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 LHFPL6Q9Y693 200 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 R4GMQ9 66 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
SYN3-201ENST00000332840 CSPG4Q6UVK1 2322 aa8.45□□□□□ -1.06
SYN3-201ENST00000332840 COL6A5A8TX70 2615 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 TRAV1-2A0A0B4J238 106 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 IQCMA0A1B0GVH7 501 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 ZNF879B4DU55 563 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 CLDN25C9JDP6 229 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 LOC110117498-PIK3R3F6TDL0 507 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 M0R1B8 84 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 GPR37O15354 613 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 PLAUP00749 431 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 CRYAAP02489 173 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 INHBBP09529 407 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 UCHL1P09936 223 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 CFL1P23528 166 aaKnown RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 MAPK3P27361 379 aaPredicted RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 CALRP27797 417 aaKnown RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 OPRL1P41146 370 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 KIR3DL2P43630 455 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 BMXP51813 675 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
SYN3-201ENST00000332840 HNRNPA0Q13151 305 aaKnown RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 TAF13Q15543 124 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 Q499Y3 187 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 HIKESHIQ53FT3 197 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 WDR38Q5JTN6 314 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 Q5PR19 223 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 FAM27BQ5VT28 67 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 SPATC1Q76KD6 591 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 CATSPERDQ86XM0 798 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 CROCCP3Q8IVE0 287 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 PRSS35Q8N3Z0 413 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 GJC3Q8NFK1 279 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 OR13C5Q8NGS8 318 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 AP3S1Q92572 193 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 NABP1Q96AH0 204 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 DHRS9Q9BPW9 319 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 WACQ9BTA9 647 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 ZNF416Q9BWM5 594 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 BARHL1Q9BZE3 327 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 WDR12Q9GZL7 423 aaKnown RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 C6orf62Q9GZU0 229 aaPredicted RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 BARX1Q9HBU1 254 aaPredicted RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 CRLF2Q9HC73 371 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 GPR35Q9HC97 309 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 NPAP1Q9NZP6 1156 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 ASH2LQ9UBL3 628 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 FBXO9Q9UK97 447 aaPredicted RBP8.44□□□□□ -1.06
SYN3-201ENST00000332840 FBXL3Q9UKT7 428 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
SYN3-201ENST00000332840 TRBV5-5A0A0J9YX44 114 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 TMEM269A0A1B0GVZ9 245 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 SRSF10O75494 262 aaKnown RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 PNPP00491 289 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 CST2P09228 141 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 DANCRP0C864 163 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 HSD11B1P28845 292 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 ARR3P36575 388 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 PTH2RP49190 550 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 MMP16P51512 607 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 FOXG1P55316 489 aaPredicted RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 ATP5J2P56134 94 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 GRB2P62993 217 aaKnown RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 HIST1H3AP68431 136 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 ARF1P84077 181 aaKnown RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 ENDOGQ14249 297 aaKnown RBP8.43□□□□□ -1.06
SYN3-201ENST00000332840 CEACAM16Q2WEN9 425 aa8.43□□□□□ -1.06
SYN3-201ENST00000332840 HSD17B12Q53GQ0 312 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms