RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SLC7A10Q9NS82 523 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 CCDC168Q8NDH2 2452 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF587BE7ETH6 402 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 RAB3BP20337 219 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 CD82P27701 267 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 NANOS3P60323 173 aaKnown RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 DVL3Q92997 716 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 SORCS2Q96PQ0 1159 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 TIMP4Q99727 224 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 GHITMQ9H3K2 345 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 EVA1AQ9H8M9 152 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 MRM2Q9UI43 246 aaKnown RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 MOKQ9UQ07 419 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 RPS10-NUDT3A0A1W2PQS6 291 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 AQP7P3A6NL99 342 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 ARL6IP5O75915 188 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 SLC2A5P22732 501 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 NUBP1P53384 320 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 FAM122BQ7Z309 247 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF227Q86WZ6 799 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 OTOSQ8NHW6 89 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 DERL3Q96Q80 235 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 DLL4Q9NR61 685 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 RCE1Q9Y256 329 aa14.02□□□□□ -0.16
PDGFB-201ENST00000331163 TMEM129A0AVI4 362 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 MEX3AA1L020 520 aaKnown RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 C5orf49A4QMS7 147 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 ARPC1BO15143 372 aaKnown RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 TRAF3IP2O43734 574 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 RRASP10301 218 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF32P17041 273 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 PLEKHN1Q494U1 663 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 SFXN4Q6P4A7 337 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 EXD3Q8N9H8 876 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 LHFPL5Q8TAF8 219 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 PIGTQ969N2 578 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 KCNJ15Q99712 375 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 MRPL22Q9NWU5 206 aaKnown RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 PFDN2Q9UHV9 154 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 PRSS50Q9UI38 385 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 FTCDNL1E5RQL4 147 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 TOR1AO14656 332 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 MFGE8Q08431 387 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 ALKBH1Q13686 389 aaKnown RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 PHYHD1Q5SRE7 291 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 THEM4Q5T1C6 240 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 C11orf88Q6PI97 169 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 LRRC28Q86X40 367 aaPredicted RBP14.02□□□□□ -0.17
PDGFB-201ENST00000331163 MARC2Q969Z3 335 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 FOXB1Q99853 325 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 MED18Q9BUE0 208 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 ARL6Q9H0F7 186 aa14.02□□□□□ -0.17
PDGFB-201ENST00000331163 hCG_1807616A0A1W2PRN6 198 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 PRR32B1ATL7 298 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF879B4DU55 563 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 SGCEO43556 437 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 RLN1P04808 185 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 HOXD4P09016 255 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF169Q14929 603 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-201ENST00000331163 ALKBH6Q3KRA9 238 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 PRR30Q53SZ7 412 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-201ENST00000331163 WDR38Q5JTN6 314 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 CLLU1Q5K131 121 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 Q6ZTK2 550 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 NLRC3Q7RTR2 1065 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 SLC26A10Q8NG04 563 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 OR2G2Q8NGZ5 317 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 GPR148Q8TDV2 347 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 NEK7Q8TDX7 302 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 KISS1RQ969F8 398 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-201ENST00000331163 AGFG2O95081 481 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 SPDEFO95238 335 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 MSR1P21757 451 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 CX3CR1P49238 355 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 TAS2R43P59537 309 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 BTG1P62324 171 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 STPG2Q8N412 459 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 PIGCQ92535 297 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 SARAFQ96BY9 339 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 TMEM41AQ96HV5 264 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 FGF20Q9NP95 211 aaPredicted RBP14.01□□□□□ -0.17
PDGFB-201ENST00000331163 OR52A1Q9UKL2 312 aa14.01□□□□□ -0.17
PDGFB-201ENST00000331163 LMX1BO60663 402 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ABHD16AO95870 558 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF121P58317 390 aaPredicted RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 NUFIP2Q7Z417 695 aaKnown RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 HDDC2Q7Z4H3 204 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 FGD2Q7Z6J4 655 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 DUSP13Q9UII6 198 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 TINAGQ9UJW2 476 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 NUBP2Q9Y5Y2 271 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ADGRG4Q8IZF6 3080 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 VAMP5O95183 116 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 PNPP00491 289 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ALOX5APP20292 161 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 PSMA6P60900 246 aaKnown RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 RPS4XP62701 263 aaKnown RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 FOXO1Q12778 655 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ADAMTS17Q8TE56 1095 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms