RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ADAM5Q6NVV9 412 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 TMEM151BQ8IW70 566 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 BCORP1Q8N888 145 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 NKAIN3Q8N8D7 197 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 DTWD2Q8NBA8 298 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 POC1AQ8NBT0 407 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 C8orf44Q96CB5 159 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 OR10C1Q96KK4 312 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 ZFYVE21Q9BQ24 234 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 TOLLIPQ9H0E2 274 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 C5orf66Q9H5L9 145 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 MRPL22Q9NWU5 206 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 HHLA2Q9UM44 414 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 LRP12Q9Y561 859 aa16.13■□□□□ 0.17
CLSTN3-202ENST00000331148 LOC107986453A0A1B0GWG9 222 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 LMX1BO60663 402 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 TNFP01375 233 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 SQSTM1Q13501 440 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 RTN4RL2Q86UN3 420 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 FAM24BQ8N5W8 94 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 FAM160A2Q8N612 972 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 OR4K15Q8NH41 348 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 LYPD6BQ8NI32 183 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 C20orf24Q9BUV8 137 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 CNTD2Q9H8S5 307 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 HEATR5AQ86XA9 2040 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 A0A1W2PPC4 97 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 S100A10P60903 97 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 ANKRD55Q3KP44 614 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 KCTD18Q6PI47 426 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 SLC22A18ASQ8N1D0 253 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 LILRB2Q8N423 598 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 TERB2Q8NHR7 220 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 MESP1Q9BRJ9 268 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 SLC26A1Q9H2B4 701 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 STARD10Q9Y365 291 aa16.12■□□□□ 0.17
CLSTN3-202ENST00000331148 TRBV23OR9-2A0A075B6M9 112 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 XKRYO14609 159 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 OR6A2O95222 327 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 CST4P01036 141 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 CT45A8P0DMV1 189 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 CT45A9P0DMV2 189 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 NPY4RP50391 375 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 RAB38P57729 211 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 ZP2Q05996 745 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 CD226Q15762 336 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 CT45A2Q5DJT8 189 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 GKN2Q86XP6 184 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 OR10G6Q8NH81 332 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 C2orf50Q96LR7 162 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 GPR132Q9UNW8 380 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 SLC34A2O95436 690 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 HKR1P10072 659 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 DEFA6Q01524 100 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 SRSF5Q13243 272 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 MAMDC2Q7Z304 686 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 PPP1R3BQ86XI6 285 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 RSC1A1Q92681 617 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 TAAR8Q969N4 342 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 RAB3CQ96E17 227 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 ABHD6Q9BV23 337 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 SPACA1Q9HBV2 294 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 EMC9Q9Y3B6 208 aa16.11■□□□□ 0.17
CLSTN3-202ENST00000331148 SPTY2D1-AS1A0A0U1RR47 76 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 SRSF10O75494 262 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 ARG1P05089 322 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 THEGLP0DJG4 465 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 NME1P15531 152 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 SULT1A1P50225 295 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 SUPT4H1P63272 117 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 QRFPP83859 136 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 MARCH3Q86UD3 253 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 OR2I1PQ8NGU4 316 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 NRSN2Q9GZP1 204 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 METTL8Q9H825 291 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 PRDM6Q9NQX0 595 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 R4GMQ9 66 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 FANCMQ8IYD8 2048 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 A6NCN8 305 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 RHPN2P1A8MT19 583 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 ZNF264O43296 627 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 PVRP15151 417 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 IL15RAQ13261 267 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 CBLN3Q6UW01 205 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 RAB33BQ9H082 229 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 OPA3Q9H6K4 179 aa16.1■□□□□ 0.17
CLSTN3-202ENST00000331148 A0A1W2PPE2 198 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 C11orf98E9PRG8 122 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 TGFBR3LH3BV60 316 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 SLC16A7O60669 478 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 TSPAN15O95858 294 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 VSIG8P0DPA2 414 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 PI3P19957 117 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 SNCAP37840 140 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 SKP2Q13309 424 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 Q3ZCU0 254 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 PYY3Q5JQD4 70 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms