RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ZNF319Q9P2F9 582 aa15.42■□□□□ 0.06
PTP4A3-201ENST00000329397 TO15178 435 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ZNF208O43345 1280 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 GLAP06280 429 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 CSNK1EP49674 416 aaKnown RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 EMP2P54851 167 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 RAB12Q6IQ22 244 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 NKAIN3Q8N8D7 197 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ZNF441Q8N8Z8 693 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 NKX6-2Q9C056 277 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 FAM117AQ9C073 453 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 A0A1W2PNR3 127 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 C5orf63A6NC05 138 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 OR6C76A6NM76 312 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 EFNA2O43921 213 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 HTR3BO95264 441 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ZNF93P35789 620 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 C14orf28Q4W4Y0 310 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 PAN3Q58A45 887 aaKnown RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 PLAC9Q5JTB6 97 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ABHD12BQ7Z5M8 362 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 TMED6Q8WW62 240 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 CHMP1AQ9HD42 196 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 GLS2Q9UI32 602 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 MSGN1A6NI15 193 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 SLC25A4P12235 298 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ADCYAP1P18509 176 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 ZNF345Q14585 488 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 MICBQ29980 383 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 KLHL24Q6TFL4 600 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 GLIPR1L1Q6UWM5 242 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 OR4K15Q8NH41 348 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 FOXRED1Q96CU9 486 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 C12orf57Q99622 126 aa15.41■□□□□ 0.06
PTP4A3-201ENST00000329397 RAD51DO75771 328 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 ACTL6AO96019 429 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 CD37P11049 281 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SLC22A24Q8N4F4 322 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 ZNF416Q9BWM5 594 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 MYOZ1Q9NP98 299 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SLC22A11Q9NSA0 550 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 IGHV1OR21-1A0A087WYE8 117 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 H0YIZ8 118 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SDCBPO00560 298 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 RER1O15258 196 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 RAMP1O60894 148 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 IL2RAP01589 272 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 IGLV3-19P01714 112 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 MMP16P51512 607 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 PLEKHN1Q494U1 663 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 DNM1P34Q6PK57 102 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 CBLN2Q8IUK8 224 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 OR10R2Q8NGX6 335 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 TSNAXQ99598 290 aaKnown RBP15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SAV1Q9H4B6 383 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 CHST11Q9NPF2 352 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SERINC1Q9NRX5 453 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 FGF21Q9NSA1 209 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 SLC2A8Q9NY64 477 aa15.4■□□□□ 0.06
PTP4A3-201ENST00000329397 COL5A1P20908 1838 aaPredicted RBP15.39■□□□□ 0.06
PTP4A3-201ENST00000329397 A0A1W2PR77 199 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 TMEM200CA6NKL6 621 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 METTL12A8MUP2 240 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 ZNF814B7Z6K7 855 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 RAB3AP20336 220 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 DAP3P51398 398 aaKnown RBP15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 SMAD4Q13485 552 aaKnown RBP15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 PDSS1Q5T2R2 415 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 LPCAT3Q6P1A2 487 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 TMEM71Q6P5X7 295 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 TMEM17Q86X19 198 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 SLC38A9Q8NBW4 561 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 OR5AP2Q8NGF4 316 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 OIT3Q8WWZ8 545 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 LPAR5Q9H1C0 372 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 OR2S2Q9NQN1 319 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 ASH2LQ9UBL3 628 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 EXPH5Q8NEV8 1989 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 A6NIZ1 184 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 ABCD4O14678 606 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 CRHP06850 196 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 RAB6AP20340 208 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 HSD11B1P28845 292 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 RAP1BP61224 184 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 RAP1AP62834 184 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 BEND4Q6ZU67 534 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 FOXRED2Q8IWF2 684 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 PUSL1Q8N0Z8 303 aaKnown RBP15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 ZSCAN4Q8NAM6 433 aaPredicted RBP15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 CLRN3Q8NCR9 226 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 OR4K17Q8NGC6 315 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 TMEM234Q8WY98 164 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 B3GAT1Q9P2W7 334 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 LHFPL6Q9Y693 200 aa15.39■□□□□ 0.05
PTP4A3-201ENST00000329397 A0A0A6YYH2 397 aa15.38■□□□□ 0.05
PTP4A3-201ENST00000329397 A6NJ64 397 aa15.38■□□□□ 0.05
PTP4A3-201ENST00000329397 NUDT21O43809 227 aaKnown RBP15.38■□□□□ 0.05
PTP4A3-201ENST00000329397 ZNF20P17024 532 aa15.38■□□□□ 0.05
PTP4A3-201ENST00000329397 PCK2Q16822 640 aa15.38■□□□□ 0.05
PTP4A3-201ENST00000329397 APCDD1LQ8NCL9 501 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms