RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SHARPINQ9H0F6 387 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 C12orf10Q9HB07 376 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 TNFSF18Q9UNG2 199 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 A8MXK9 166 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 SULT2B1O00204 365 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 QDPRP09417 244 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 TPT1P13693 172 aaKnown RBP11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 PVALBP20472 110 aaPredicted RBP11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 LAP3P28838 519 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 CLDN17P56750 224 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 NKAIN1Q4KMZ8 207 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 JMJD6Q6NYC1 403 aaPredicted RBP11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 OVCH2Q7RTZ1 564 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 RASL12Q9NYN1 266 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 GLS2Q9UI32 602 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 TMEM200CA6NKL6 621 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 STMND1H3BQB6 276 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 CX3CR1P49238 355 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF260Q3ZCT1 412 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 RAET1LQ5VY80 246 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 MVB12AQ96EY5 273 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 CDC6Q99741 560 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF160Q9HCG1 818 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 IGKV3D-11A0A0A0MRZ8 115 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 PIAS2O75928 621 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 SERPINA5P05154 406 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 NME2P22392 152 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 FDX2Q6P4F2 183 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 SPAG16Q8N0X2 631 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 ALX4Q9H161 411 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 FAM96BQ9Y3D0 163 aa11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 LSM5Q9Y4Y9 91 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-201ENST00000325110 OR6C65A6NJZ3 312 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 SCRG1O75711 98 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF735P0CB33 412 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 PPIAP62937 165 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 MICBQ29980 383 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 LPCAT3Q6P1A2 487 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 CBLN2Q8IUK8 224 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 LDAHQ9H6V9 325 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 MYO7BQ6PIF6 2116 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 A0A1W2PQD3 144 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 TLX3O43711 291 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 TMEM225BP0DP42 221 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ZBTB25P24278 435 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 APOBEC1P41238 236 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 FXYD4P59646 89 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 SYT13Q7L8C5 426 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 SLC25A42Q86VD7 318 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 MFSD8Q8NHS3 518 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 RNF133Q8WVZ7 376 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF768Q9H5H4 540 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 RNF222A6NCQ9 220 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 RAMP1O60894 148 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 NPIPB7O75200 414 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 FAHP16930 419 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 KLK2P20151 261 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 CSRP1P21291 193 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 GLRA1P23415 457 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ITGA3P26006 1051 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 RBMXP38159 391 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 MECP2P51608 486 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 SNU13P55769 128 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 TDGQ13569 410 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 FAM166AQ6J272 317 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 NAA40Q86UY6 237 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 SMRP1Q8NCR6 262 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 OR8B12Q8NGG6 310 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ARL11Q969Q4 196 aa11.44□□□□□ -0.58
HMGCS1-201ENST00000325110 ANKUB1A6NFN9 424 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 FCGR2AP12318 317 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 IGFBP3P17936 291 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 GALNSP34059 522 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 CFHR1Q03591 330 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 PDSS1Q5T2R2 415 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 ZFP82Q8N141 532 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 TERB2Q8NHR7 220 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 KCNG3Q8TAE7 436 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 ST8SIA1Q92185 356 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 PLEK2Q9NYT0 353 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 FAM221AA4D161 298 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 NUDT21O43809 227 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 FSTP19883 344 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 MMP16P51512 607 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 GUCA2BQ16661 112 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF813Q6ZN06 617 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 PAQR4Q8N4S7 273 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 SLC38A9Q8NBW4 561 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 BHLHE23Q8NDY6 225 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 OR51F2Q8NH61 342 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 MITD1Q8WV92 249 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 FSCN3Q9NQT6 498 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 C14orf166Q9Y224 244 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms